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Report for CCDS59239.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59239.1 Public Homo sapiens 12 ZNF268 24 110 108 CCDS HistoryNCBI Gene:10795Re-query CCDS DB by CCDS ID:59239.1Re-query CCDS DB by GeneID:10795See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59239.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541009.6 ENSP00000439539.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541009.6Link to Ensembl Protein Viewer:ENSP00000439539.2Re-query CCDS DB by Nucleotide ID:ENST00000541009Re-query CCDS DB by Protein ID:ENSP00000439539
Original member Current member NCBI NM_152943.3 NP_694422.2 Accepted alive Link to Nucleotide Sequence:NM_152943.3Link to Protein Sequence:NP_694422.2Re-query CCDS DB by Nucleotide ID:NM_152943Re-query CCDS DB by Protein ID:NP_694422Link to BLAST:NP_694422.2

Chromosomal Locations for CCDS 59239.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 133181998 133182030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133187872 133188072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133191489 133191615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133191908 133192003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133193428 133193533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133202144 133202162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCCACCAGGGTCCGGACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATA
GGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTGCAACCTCTCCCTGG
AACACCCAGGCAGAAGCAGAAGAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTCCCAAGAG
CAGCCAAAAATCACCAAGTCCTGGGGACCTTTGTCATTCATGGATGTGTTTGTGGATTTTACCTGGGAGG
AGTGGCAGCTGCTAGACCCAGCACAGAAGTGCCTGTACAGGAGTGTGATGTTGGAGAACTATAGCAACCT
GGTGTCCCTAGGGTACCAACACACCAAACCTGATATCATCTTCAAGTTGGAACAAGGAGAAGAGCTGTGT
ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAGCCAAGGTGC
TGGCAGGTTTGGTGTCTGGTGAGGGCCTGCTCTGTGCTTCCAAGATGACGCCTTGTTGCTGCATCCTCTG
GAGACACAGTCTGGAAAATTGA

Translation (193 aa):
MATRVRTASIWVPPLQERNSSWDRIRKLQGQESILGQGTPGLQPLPGTPRQKQKSRRIEKVLEWLFISQE
QPKITKSWGPLSFMDVFVDFTWEEWQLLDPAQKCLYRSVMLENYSNLVSLGYQHTKPDIIFKLEQGEELC
MVQAQVPNQTCPILKAGKSKAKVLAGLVSGEGLLCASKMTPCCCILWRHSLEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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