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Report for CCDS45012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45012.1 Public Homo sapiens 12 ZNF268 24 110 108 CCDS HistoryNCBI Gene:10795Re-query CCDS DB by CCDS ID:45012.1Re-query CCDS DB by GeneID:10795See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45012.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228289.9 ENSP00000228289.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000228289.9Link to Ensembl Protein Viewer:ENSP00000228289.5Re-query CCDS DB by Nucleotide ID:ENST00000228289Re-query CCDS DB by Protein ID:ENSP00000228289
Original member Current member EBI ENST00000536435.7 ENSP00000444412.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000536435.7Link to Ensembl Protein Viewer:ENSP00000444412.3Re-query CCDS DB by Nucleotide ID:ENST00000536435Re-query CCDS DB by Protein ID:ENSP00000444412
Original member Current member NCBI NM_001165881.3 NP_001159353.1 Accepted alive Link to Nucleotide Sequence:NM_001165881.3Link to Protein Sequence:NP_001159353.1Re-query CCDS DB by Nucleotide ID:NM_001165881Re-query CCDS DB by Protein ID:NP_001159353Link to BLAST:NP_001159353.1
Original member Current member NCBI NM_003415.3 NP_003406.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003415.3Link to Protein Sequence:NP_003406.1Re-query CCDS DB by Nucleotide ID:NM_003415Re-query CCDS DB by Protein ID:NP_003406Link to BLAST:NP_003406.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159353.1 947 Q14587-1 947 100% 0 0
NP_003406.1 947 Q14587-1 947 100% 0 0

Chromosomal Locations for CCDS 45012.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 133181998 133182030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133187872 133188072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133191489 133191615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133191908 133192003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133202144 133204530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2844 nt):
ATGGCCACCAGGGTCCGGACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATA
GGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTGCAACCTCTCCCTGG
AACACCCAGGCAGAAGCAGAAGAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTCCCAAGAG
CAGCCAAAAATCACCAAGTCCTGGGGACCTTTGTCATTCATGGATGTGTTTGTGGATTTTACCTGGGAGG
AGTGGCAGCTGCTAGACCCAGCACAGAAGTGCCTGTACAGGAGTGTGATGTTGGAGAACTATAGCAACCT
GGTGTCCCTAGGGTACCAACACACCAAACCTGATATCATCTTCAAGTTGGAACAAGGAGAAGAGCTGTGT
ATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAAACACAGTCTGGAAAATTGATGATCTTATGGATT
GGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAAAACT
ATGTCTTCTTAGTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTTTG
AAATATATAGATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGAAAATCAT
TCTTCCATTCTAAACATGAGCAAACTGTTATTGGAATAAAATACTGTGAAAGTATTGAATCTGGAAAAAC
CGTCAATAAGAAATCGCAACTTATGTGCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGT
TGTGAGAAAGCCTTCAGCAGCAAGTCATACCTTCTAGTGCATCAGCAAACTCATGCCGAAGAGAAACCCT
ATGGTTGTAATGAATGTGGGAAAGACTTCAGTAGTAAATCATACCTCATTGTACATCAGAGAATTCATAC
AGGAGAGAAACTACATGAATGCAGTGAATGCAGGAAAACATTCAGTTTCCATTCACAGCTTGTTATACAT
CAGAGAATTCACACAGGTGAGAATCCCTATGAGTGCTGTGAATGTGGGAAAGTCTTCAGTAGGAAAGACC
AGCTTGTTTCACACCAGAAAACTCATTCAGGACAGAAACCATATGTGTGTAATGAATGTGGGAAAGCTTT
TGGTTTAAAATCACAGCTCATTATACATGAAAGAATTCATACAGGAGAGAAACCATATGAATGCAATGAA
TGTCAGAAAGCCTTTAATACAAAGTCAAACCTTATGGTACATCAGAGAACCCATACAGGGGAGAAACCTT
ATGTTTGTAGTGATTGTGGAAAAGCCTTTACATTCAAGTCACAGCTCATTGTACATCAGGGGATTCACAC
AGGAGTAAAGCCCTATGGGTGTATTCAGTGTGGTAAAGGATTCAGTTTGAAATCACAGCTCATTGTACAT
CAGAGAAGTCACACAGGAATGAAACCTTATGTATGCAATGAATGTGGCAAAGCCTTCAGGAGCAAGTCAT
ACCTTATTATACATACAAGGACTCATACAGGAGAAAAACTCCATGAATGCAACAATTGTGGGAAAGCCTT
CAGTTTTAAATCACAGCTCATTATACATCAGAGGATTCATACAGGAGAGAACCCCTATGAATGCCATGAA
TGTGGGAAAGCCTTCAGTCGGAAATACCAGCTTATTTCACACCAGAGAACTCATGCAGGAGAGAAGCCTT
ATGAATGCACCGACTGTGGAAAGGCTTTTGGTTTAAAGTCACAGCTTATTATACACCAGAGAACTCATAC
AGGGGAGAAACCATTTGAATGTAGTGAGTGTCAGAAAGCCTTTAATACAAAGTCAAACCTGATTGTACAT
CAGAGAACTCATACAGGAGAGAAACCCTATAGTTGTAATGAATGTGGAAAAGCCTTTACGTTCAAATCAC
AGCTCATTGTACATAAAGGAGTGCACACTGGAGTAAAACCCTATGGATGCAGTCAATGTGCAAAAACCTT
TAGTTTGAAGTCCCAGCTCATTGTACATCAGAGAAGTCACACAGGAGTAAAACCATATGGATGCAGTGAG
TGTGGGAAAGCCTTCAGGAGCAAGTCATACCTTATTATACATATGAGAACTCATACAGGAGAGAAACCAC
ATGAGTGCAGGGAATGCGGGAAATCCTTTAGTTTCAATTCACAACTCATTGTGCATCAGAGAATTCACAC
AGGAGAAAATCCCTATGAATGCAGTGAATGTGGGAAAGCCTTTAATAGGAAAGACCAGCTCATTTCACAT
CAGCGAACTCATGCAGGGGAAAAGCCTTATGGGTGCAGTGAATGTGGGAAAGCTTTTAGCAGCAAGTCAT
ACCTAATTATACACATGAGAACTCATTCAGGTGAAAAACCATATGAATGTAATGAATGTGGGAAAGCCTT
CATTTGGAAATCACTACTCATTGTACATGAGCGAACTCATGCAGGGGTCAACCCTTATAAATGCAGTCAA
TGTGAGAAATCCTTCAGTGGGAAATTACGCCTTCTTGTACACCAGAGAATGCACACAAGAGAGAAACCAT
ATGAATGCAGTGAGTGTGGAAAAGCCTTCATTAGGAATTCTCAACTCATTGTACATCAAAGAACTCATTC
AGGAGAGAAACCCTATGGGTGCAATGAATGTGGGAAAACCTTCTCTCAAAAATCAATTCTCAGTGCACAT
CAGAGAACACATACAGGAGAGAAGCCTTGTAAGTGCACTGAATGTGGGAAAGCCTTTTGTTGGAAGTCAC
AGCTCATTATGCATCAGAGAACTCATGTAGATGACAAACATTGA

Translation (947 aa):
MATRVRTASIWVPPLQERNSSWDRIRKLQGQESILGQGTPGLQPLPGTPRQKQKSRRIEKVLEWLFISQE
QPKITKSWGPLSFMDVFVDFTWEEWQLLDPAQKCLYRSVMLENYSNLVSLGYQHTKPDIIFKLEQGEELC
MVQAQVPNQTCPNTVWKIDDLMDWHQENKDKLGSTAKSFECTTFGKLCLLSTKYLSRQKPHKCGTHGKSL
KYIDFTSDYARNNPNGFQVHGKSFFHSKHEQTVIGIKYCESIESGKTVNKKSQLMCQQMYMGEKPFGCSC
CEKAFSSKSYLLVHQQTHAEEKPYGCNECGKDFSSKSYLIVHQRIHTGEKLHECSECRKTFSFHSQLVIH
QRIHTGENPYECCECGKVFSRKDQLVSHQKTHSGQKPYVCNECGKAFGLKSQLIIHERIHTGEKPYECNE
CQKAFNTKSNLMVHQRTHTGEKPYVCSDCGKAFTFKSQLIVHQGIHTGVKPYGCIQCGKGFSLKSQLIVH
QRSHTGMKPYVCNECGKAFRSKSYLIIHTRTHTGEKLHECNNCGKAFSFKSQLIIHQRIHTGENPYECHE
CGKAFSRKYQLISHQRTHAGEKPYECTDCGKAFGLKSQLIIHQRTHTGEKPFECSECQKAFNTKSNLIVH
QRTHTGEKPYSCNECGKAFTFKSQLIVHKGVHTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPYGCSE
CGKAFRSKSYLIIHMRTHTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPYECSECGKAFNRKDQLISH
QRTHAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPYECNECGKAFIWKSLLIVHERTHAGVNPYKCSQ
CEKSFSGKLRLLVHQRMHTREKPYECSECGKAFIRNSQLIVHQRTHSGEKPYGCNECGKTFSQKSILSAH
QRTHTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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