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Report for CCDS35235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35235.1 Public Homo sapiens X ZNF182 24 110 108 CCDS HistoryNCBI Gene:7569Re-query CCDS DB by CCDS ID:35235.1Re-query CCDS DB by GeneID:7569See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35235.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376943.8 ENSP00000366142.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376943.8Link to Ensembl Protein Viewer:ENSP00000366142.4Re-query CCDS DB by Nucleotide ID:ENST00000376943Re-query CCDS DB by Protein ID:ENSP00000366142
Original member Current member NCBI NM_001007088.2 NP_001007089.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001007088.2Link to Protein Sequence:NP_001007089.1Re-query CCDS DB by Nucleotide ID:NM_001007088Re-query CCDS DB by Protein ID:NP_001007089Link to BLAST:NP_001007089.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007089.1 620 P17025-2 620 100% 0 0

Chromosomal Locations for CCDS 35235.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 47976167 47977797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47982949 47983038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47983285 47983411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48002595 48002609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1863 nt):
ATGGCCAAACCCCAGGGGCTAGTGACATTTGAAGATGTAGCTGTGGATTTCACCCAGGAGGAGTGGCAGT
ACCTGAACCCACCACAGAGGACCCTGTACAGAGACGTGATGCTGGAGACCTACAGCAACTTGGTCTTTGT
GGGGCAGCAGGTTACCAAACCAAACCTCATCCTCAAGTTGGAGGTAGAAGAATGCCCGGCAGAAGGAAAA
ATCCCATTTTGGAACTTTCCAGAAGTCTGTCAAGTTGATGAACAGATTGAGAGGCAACATCAGGATGACC
AAGATAAATGTCTGCTGATGCAAGTTGGATTTTCTGACAAGAAAACAATTATCACCAAGAGTGCTCGTGA
CTGTCATGAGTTTGGAAACATACTTCATCTGAGTACAAACCTTGTTGCTTCAATACAAAGACCCGATAAA
CACGAATCATTTGGAAATAATATGGTAGATAATTTAGACTTATTTAGTAGAAGTTCTGCAGAAAATAAAT
ATGATAATGGATGTGCAAAATTGTTCTTCCATACTGAGTATGAGAAAACAAATCCTGGAATGAAGCCCTA
TGGCTATAAAGAGTGTGGGAAAGGTCTTAGGCGAAAGAAAGGCCTTAGTCTACATCAGAGAATTAAAAAT
GGAGAGAAACCCTTTGAATGTACTGCATGTAGGAAAACCTTCAGCAAGAAGTCACACCTCATTGTACATT
GGAGAACTCATACGGGAGAGAAACCTTTTGGATGTACCGAATGTGGAAAAGCTTTTAGCCAAAAATCTCA
GCTCATTATACACTTGCGAACTCATACAGGAGAGAGACCCTTTGAGTGTCCTGAATGTGGAAAAGCCTTC
AGAGAAAAGTCAACTGTCATCATACATTACAGGACTCACACAGGAGAAAAACCTTATGAATGTAATGAAT
GTGGAAAAGCCTTCACTCAGAAGTCCAACCTCATTGTCCATCAGAAAACCCACACTGGAGAGAAAACCTA
TGAATGCACTAAATGTGGAGAATCTTTCATACAGAAGCTTGATCTAATTATACATCATAGTACCCATACA
GGAAAGAAACCCCATGAATGTAATGAGTGTAAGAAAACTTTCAGTGATAAGTCAACTCTCATTATACACC
AGAGAACTCATACGGGAGAGAAACCTCATAAATGTACTGAATGTGGGAAGTCTTTCAATGAGAAGTCAAC
CCTCATTGTGCATCAAAGAACTCATACAGGAGAGAAACCCTATGAATGTGATGTGTGTGGAAAAACCTTC
ACGCAAAAGTCAAACCTTGGTGTACATCAGAGAACTCATTCAGGAGAGAAACCCTTTGAATGTAATGAAT
GTGAGAAAGCCTTCTCTCAGAAGTCCTACCTCATGCTGCATCAGAGAGGTCATACAGGAGAGAAACCTTA
CGAGTGCAATGAATGTGAAAAAGCATTTTCACAGAAATCATATCTCATTATACATCAAAGAACTCATACA
GAAGAAAAACCCTATAAATGTAATGAATGTGGCAAAGCCTTCAGAGAAAAGTCAAAGCTCATTATACATC
AGAGAATTCATACAGGAGAGAAACCTTATGAATGTCCTGTGTGTTGGAAAGCTTTTAGCCAGAAGTCACA
GCTCATAATACATCAGAGAACGCACACGGGAGAGAAACCCTATGCATGCACTGAGTGTGGCAAAGCCTTC
CGAGAAAAGTCAACATTCACTGTACATCAAAGAACTCATACTGGAGAGAAACCCTATAAATGTACAGAAT
GTGGGAAAGCCTTTACCCAAAAATCAAACCTTATTGTACATCAGCGAACCCATGCAGGAAAGAAAGCCCA
TGGAAGAGGCCACACTCGGAAGTCAAAGTTCATGGCACATTAG

Translation (620 aa):
MAKPQGLVTFEDVAVDFTQEEWQYLNPPQRTLYRDVMLETYSNLVFVGQQVTKPNLILKLEVEECPAEGK
IPFWNFPEVCQVDEQIERQHQDDQDKCLLMQVGFSDKKTIITKSARDCHEFGNILHLSTNLVASIQRPDK
HESFGNNMVDNLDLFSRSSAENKYDNGCAKLFFHTEYEKTNPGMKPYGYKECGKGLRRKKGLSLHQRIKN
GEKPFECTACRKTFSKKSHLIVHWRTHTGEKPFGCTECGKAFSQKSQLIIHLRTHTGERPFECPECGKAF
REKSTVIIHYRTHTGEKPYECNECGKAFTQKSNLIVHQKTHTGEKTYECTKCGESFIQKLDLIIHHSTHT
GKKPHECNECKKTFSDKSTLIIHQRTHTGEKPHKCTECGKSFNEKSTLIVHQRTHTGEKPYECDVCGKTF
TQKSNLGVHQRTHSGEKPFECNECEKAFSQKSYLMLHQRGHTGEKPYECNECEKAFSQKSYLIIHQRTHT
EEKPYKCNECGKAFREKSKLIIHQRIHTGEKPYECPVCWKAFSQKSQLIIHQRTHTGEKPYACTECGKAF
REKSTFTVHQRTHTGEKPYKCTECGKAFTQKSNLIVHQRTHAGKKAHGRGHTRKSKFMAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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