NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31837.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31837.1 Public Homo sapiens 12 NACA 24 110 108 CCDS HistoryNCBI Gene:4666Re-query CCDS DB by CCDS ID:31837.1Re-query CCDS DB by GeneID:4666See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31837.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356769.7 ENSP00000349212.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356769.7Link to Ensembl Protein Viewer:ENSP00000349212.3Re-query CCDS DB by Nucleotide ID:ENST00000356769Re-query CCDS DB by Protein ID:ENSP00000349212
Original member Current member EBI ENST00000393891.8 ENSP00000377469.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393891.8Link to Ensembl Protein Viewer:ENSP00000377469.4Re-query CCDS DB by Nucleotide ID:ENST00000393891Re-query CCDS DB by Protein ID:ENSP00000377469
Original member Current member EBI ENST00000546392.6 ENSP00000446801.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546392.6Link to Ensembl Protein Viewer:ENSP00000446801.1Re-query CCDS DB by Nucleotide ID:ENST00000546392Re-query CCDS DB by Protein ID:ENSP00000446801
Original member Current member EBI ENST00000552540.5 ENSP00000447821.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552540.5Link to Ensembl Protein Viewer:ENSP00000447821.1Re-query CCDS DB by Nucleotide ID:ENST00000552540Re-query CCDS DB by Protein ID:ENSP00000447821
Original member Current member EBI ENST00000678066.1 ENSP00000503345.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678066.1Link to Ensembl Protein Viewer:ENSP00000503345.1Re-query CCDS DB by Nucleotide ID:ENST00000678066Re-query CCDS DB by Protein ID:ENSP00000503345
Original member Current member NCBI NM_001113202.2 NP_001106673.1 Accepted alive Link to Nucleotide Sequence:NM_001113202.2Link to Protein Sequence:NP_001106673.1Re-query CCDS DB by Nucleotide ID:NM_001113202Re-query CCDS DB by Protein ID:NP_001106673Link to BLAST:NP_001106673.1
Original member Current member NCBI NM_001320193.2 NP_001307122.1 Accepted alive Link to Nucleotide Sequence:NM_001320193.2Link to Protein Sequence:NP_001307122.1Re-query CCDS DB by Nucleotide ID:NM_001320193Re-query CCDS DB by Protein ID:NP_001307122Link to BLAST:NP_001307122.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106673.1 215 Q13765-1 215 100% 0 0
NP_001307122.1 215 Q13765-1 215 100% 0 0

Chromosomal Locations for CCDS 31837.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56712538 56712552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56712786 56712908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56713062 56713190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56713537 56713683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56714362 56714439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56714602 56714687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56724452 56724521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (648 nt):
ATGCCCGGCGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCGCAGCCCCAGGCTGAGACAG
GGTCTGGAACAGAATCTGACAGTGATGAATCAGTACCAGAGCTTGAAGAACAGGATTCCACCCAGGCAAC
CACACAACAAGCCCAGCTGGCGGCAGCAGCTGAAATTGATGAAGAACCAGTCAGTAAAGCAAAACAGAGT
CGGAGTGAAAAGAAGGCACGGAAGGCTATGTCCAAACTGGGTCTTCGGCAGGTTACAGGAGTTACTAGAG
TCACTATCCGGAAATCTAAGAATATCCTCTTTGTCATCACAAAACCAGATGTCTACAAGAGCCCTGCTTC
AGATACTTACATAGTTTTTGGGGAAGCCAAGATCGAAGATTTATCCCAGCAAGCACAACTAGCAGCTGCT
GAGAAATTCAAAGTTCAAGGTGAAGCTGTCTCAAACATTCAAGAAAACACACAGACTCCAACTGTACAAG
AGGAGAGTGAAGAGGAAGAGGTCGATGAAACAGGTGTAGAAGTTAAGGACATTGAATTGGTCATGTCACA
AGCAAATGTGTCGAGAGCAAAGGCAGTCCGAGCCCTGAAGAACAACAGTAATGATATTGTAAATGCGATT
ATGGAATTAACAATGTAA

Translation (215 aa):
MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQS
RSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAA
EKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAI
MELTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH