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Report for CCDS5667.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
5667.1 |
Public |
Homo sapiens |
7 |
ZKSCAN5 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23660](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:5667.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23660](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 5667.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000326775.10 |
ENSP00000322872.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000326775.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000322872.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000326775](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000322872](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000394170.6 |
ENSP00000377725.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000394170.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000377725.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000394170](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000377725](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000451158.5 |
ENSP00000392104.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000451158.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000392104.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000451158](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000392104](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318082.2 |
NP_001305011.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318082.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305011.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318082](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305011](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305011.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014569.4 |
NP_055384.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014569.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055384.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014569](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055384](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055384.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_145102.4 |
NP_659570.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_145102.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_659570.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_145102](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_659570](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_659570.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 5667.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2520 nt): ATGATAATGACCGAATCCCGAGAAGTTATAGACTTAGACCCCCCAGCTGAGACTTCCCAGGAGCAGGAAG ACCTTTTCATAGTGAAGGTGGAAGAAGAAGACTGCACCTGGATGCAGGAGTACAACCCGCCAACGTTTGA GACTTTTTACCAGCGCTTCAGGCACTTCCAGTACCATGAGGCTTCAGGACCCCGGGAGGCTCTCAGCCAA CTCCGGGTGCTCTGCTGTGAGTGGCTGAGGCCCGAGCTGCACACGAAGGAGCAGATCCTGGAGCTGCTGG TGCTGGAGCAGTTCCTGACCATCCTGCCTGAAGAGTTCCAGCCCTGGGTGAGGGAACATCACCCTGAAAG TGGAGAAGAGGCGGTGGCCGTGATAGAAAATATACAGCGAGAACTTGAGGAACGCAGACAGCAGATTGTT GCCTGCCCTGATGTGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTGCAGGAGTCCTGCAGCCCCCATC CCCTGACCGTGGACACCCAGCCTGAGCAAGCGCCACAGAAGCCTCGTCTCCTGGAGGAAAATGCCCTTCC TGTTCTCCAAGTTCCTTCCCTTCCCCTGAAGGACAGCCAGGAGCTGACAGCTTCACTTCTCTCAACTGGG TCCCAGAAGTTGGTGAAAATTGAAGAGGTGGCTGATGTGGCTGTATCCTTCATCCTGGAGGAATGGGGGC ATTTGGACCAGTCCCAGAAGTCCCTTTATAGGGATGACAGGAAGGAGAACTATGGGAGTATTACTTCCAT GGGTTATGAGTCCAGGGACAATATGGAGCTCATAGTGAAGCAGATTTCTGATGACTCTGAATCACACTGG GTGGCGCCAGAACACACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTTAAAG GCATGGTACAAAGGTGGCAGGTCAACCCCACTGTGGGGAAATCAAGGCAGAATCCTTCCCAGAAAAGGGA TCTGGATGCAATCACAGACATCAGCCCTAAGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGAT TGTGGCAAATTCTTCCTCCAAGCCTCAAACTTTATTCAGCATCGGCGCATCCACACTGGAGAAAAACCGT TTAAGTGCGGAGAATGTGGGAAGAGCTACAATCAGCGGGTGCACCTCACCCAGCACCAGCGCGTCCACAC AGGGGAGAAACCCTACAAATGTCAGGTGTGCGGAAAGGCTTTCCGGGTGAGTTCCCACCTGGTTCAGCAC CACAGTGTCCACAGCGGAGAGAGGCCCTATGGCTGCAATGAGTGTGGGAAGAACTTCGGTCGCCATTCGC ATCTGATCGAACACCTAAAACGCCACTTCAGGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTAAGAA CACAAAATTAAGTGTTAAGAAGAAAATTTCAGAATATTCAGAAGCAGACATGGAACTATCTGGAAAAACC CAAAGAAATGTTTCTCAAGTTCAAGATTTTGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGC AGGGAATTCCCATGAAAGAGATACTAGGACAACCATCTTCAAAGAGGATGAACTACAGTGAAGTCCCATA TGTCCACAAAAAATCCTCCACTGGAGAGAGACCACATAAATGTAACGAGTGTGGGAAAAGCTTCATTCAG AGTGCACATCTTATTCAACATCAAAGAATACACACTGGGGAGAAACCATTCAGGTGTGAGGAATGTGGGA AAAGCTACAACCAACGCGTGCACCTAACTCAGCATCAGCGCGTCCACACAGGTGAGAAGCCCTACACCTG TCCCTTATGTGGGAAAGCCTTCAGAGTGAGGTCCCACCTTGTTCAGCATCAGAGCGTGCACAGTGGGGAG AGACCCTTCAAGTGTAACGAATGTGGGAAAGGCTTTGGGAGGCGTTCCCACCTGGCTGGACATCTTCGAC TCCACTCCCGAGAGAAATCCCATCAGTGTCGTGAATGTGGGGAAATCTTTTTTCAGTACGTTAGCCTAAT TGAACATCAGGTGCTCCACATGGGTCAGAAAAATGAAAAAAATGGCATCTGTGAGGAAGCATATAGTTGG AACTTGACAGTGATTGAAGACAAGAAGATTGAGTTACAAGAGCAGCCTTATCAGTGTGATATCTGTGGAA AAGCCTTTGGTTATAGCTCAGACCTCATTCAGCATTACAGAACTCATACAGCAGAGAAGCCCTATCAATG TGATATATGTAGAGAAAATGTTGGCCAGTGTTCCCACACCAAACAACATCAAAAAATCTACTCCAGCACA AAATCCCATCAATGTCATGAATGTGGCAGAGGCTTCACTCTGAAGTCACATCTTAATCAACATCAGAGAA TCCATACTGGTGAGAAACCTTTTCAATGTAAAGAATGTGGAATGAATTTCAGCTGGAGTTGTAGCCTCTT TAAACACCTGAGAAGCCATGAGAGGACAGATCCCATAAATACCTTAAGTGTAGAGGGGTCTCTGTTGTAG
Translation (839 aa): MIMTESREVIDLDPPAETSQEQEDLFIVKVEEEDCTWMQEYNPPTFETFYQRFRHFQYHEASGPREALSQ LRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVAVIENIQRELEERRQQIV ACPDVLPRKMATPGAVQESCSPHPLTVDTQPEQAPQKPRLLEENALPVLQVPSLPLKDSQELTASLLSTG SQKLVKIEEVADVAVSFILEEWGHLDQSQKSLYRDDRKENYGSITSMGYESRDNMELIVKQISDDSESHW VAPEHTERSVPQDPDFAEVSDLKGMVQRWQVNPTVGKSRQNPSQKRDLDAITDISPKQSTHGERGHRCSD CGKFFLQASNFIQHRRIHTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQH HSVHSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSQRCSDKRSKNTKLSVKKKISEYSEADMELSGKT QRNVSQVQDFGEGCEFQGKLDRKQGIPMKEILGQPSSKRMNYSEVPYVHKKSSTGERPHKCNECGKSFIQ SAHLIQHQRIHTGEKPFRCEECGKSYNQRVHLTQHQRVHTGEKPYTCPLCGKAFRVRSHLVQHQSVHSGE RPFKCNECGKGFGRRSHLAGHLRLHSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNEKNGICEEAYSW NLTVIEDKKIELQEQPYQCDICGKAFGYSSDLIQHYRTHTAEKPYQCDICRENVGQCSHTKQHQKIYSST KSHQCHECGRGFTLKSHLNQHQRIHTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPINTLSVEGSLL
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