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Report for CCDS6031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6031.1 Public Homo sapiens 8 SORBS3 24 110 108 CCDS HistoryNCBI Gene:10174Re-query CCDS DB by CCDS ID:6031.1Re-query CCDS DB by GeneID:10174See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6031.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000240123.12 ENSP00000240123.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000240123.12Link to Ensembl Protein Viewer:ENSP00000240123.7Re-query CCDS DB by Nucleotide ID:ENST00000240123Re-query CCDS DB by Protein ID:ENSP00000240123
Original member Current member NCBI NM_005775.5 NP_005766.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005775.5Link to Protein Sequence:NP_005766.3Re-query CCDS DB by Nucleotide ID:NM_005775Re-query CCDS DB by Protein ID:NP_005766Link to BLAST:NP_005766.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005766.3 671 O60504-1 671 100% 0 0

Chromosomal Locations for CCDS 6031.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 22554507 22554608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22554863 22554980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22556715 22556908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22558129 22558192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22561335 22561373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22561865 22561931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22563987 22564077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22564283 22564369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22564468 22564521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22565268 22565354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22565826 22565872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22566345 22566484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22566661 22566713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22566822 22566868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22567061 22567175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22569148 22569273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22570910 22571221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22571718 22571821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22572340 22572446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22574667 22574728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2016 nt):
ATGCAGGGCCCACCCCGCAGCCTCCGCGCTGGGCTCAGCCTGGACGACTTCATCCCTGGCCACCTCCAGT
CCCACATAGGGTCTTCCTCCCGGGGGACACGGGTGCCCGTGATCCGGAATGGTGGCTCCAACACCCTTAA
TTTCCAGTTCCACGACCCCGCGCCCAGGACTGTGTGCAATGGGGGCTACACACCAAGACGAGATGCTTCC
CAGCACCCGGACCCTGCGTGGTATCAGACCTGGCCAGGCCCTGGGAGCAAGCCCTCTGCAAGCACAAAGA
TCCCTGCCTCCCAGCACACCCAGAACTGGTCAGCCACGTGGACCAAGGACAGCAAGCGTCGGGACAAGCG
CTGGGTCAAGTACGAGGGAATCGGGCCCGTGGACGAGAGCGGCATGCCCATTGCCCCCCGATCCAGCGTT
GACAGACCCAGAGACTGGTACCGGAGAATGTTCCAGCAGATTCACCGGAAAATGCCAGACTTGCAGCTGG
ACTGGACCTTCGAGGAGCCACCCAGAGACCCCAGGCATCTAGGAGCCCAGCAAAGACCTGCCCACAGGCC
CGGCCCGGCAACATCTTCCAGTGGAAGAAGCTGGGACCACTCTGAAGAGTTACCTAGAAGCACCTTCAAC
TACAGACCTGGAGCATTCTCCACTGTGCTGCAGCCCTCAAATCAGGTGCTCAGACGCCGGGAAAAAGTAG
ACAATGTCTGGACGGAAGAGTCCTGGAACCAGTTTCTGCAGGAACTAGAGACTGGGCAGAGGCCCAAGAA
ACCGCTGGTGGACGACCCTGGTGAGAAGCCCTCCCAGCCCATTGAGGTGCTGCTGGAGAGAGAGCTGGCC
GAGCTGAGCGCCGAGCTGGACAAGGACCTGCGGGCAATTGAGACCCGACTGCCGTCCCCCAAGAGCTCGC
CGGCGCCCCGACGGGCCCCGGAGCAGCGGCCCCCGGCCGGCCCGGCCTCAGCCTGGAGCTCCAGCTACCC
ACATGCACCTTACCTGGGTTCCGCCCGGTCCCTGAGTCCCCACAAAATGGCTGATGGAGGAAGCCCCTTC
CTAGGTCGGAGGGACTTTGTCTACCCTTCCTCAACCCGAGACCCTAGTGCCTCTAACGGAGGGGGCAGCC
CAGCCAGGAGGGAAGAGAAGAAGAGAAAGGCCGCCAGGCTCAAGTTTGACTTCCAGGCGCAGTCCCCCAA
GGAGCTGACTCTGCAGAAGGGTGACATTGTCTACATCCACAAGGAGGTGGACAAGAACTGGCTGGAGGGA
GAGCACCACGGCCGCCTGGGCATCTTCCCTGCTAATTATGTGGAGGTGCTGCCCGCAGATGAGATCCCTA
AGCCCATCAAGCCCCCGACCTACCAGGTGCTGGAGTATGGAGAGGCTGTGGCCCAGTACACCTTCAAGGG
GGACCTGGAGGTGGAGCTGTCCTTCCGCAAGGGAGAGCACATCTGCCTGATCCGCAAGGTGAACGAGAAC
TGGTACGAGGGACGCATCACGGGCACGGGGCGCCAAGGCATATTCCCTGCCAGCTACGTGCAGGTGTCTC
GTGAACCCCGGCTCCGGCTCTGTGACGACGGCCCCCAGCTCCCCACGTCTCCCCGCCTGACCGCTGCCGC
CCGCTCAGCCCGTCACCCCAGCTCCCCCTCAGCCCTGCGCAGCCCAGCTGACCCCATCGACTTGGGGGGA
CAGACCTCCCCCCGTCGCACTGGCTTCTCCTTCCCCACCCAGGAGCCTAGACCCCAGACCCAGAATCTTG
GCACCCCTGGTCCAGCTCTGTCCCACTCTCGAGGTCCCAGCCATCCCCTGGACCTGGGGACCTCCTCTCC
TAACACCTCTCAGATACACTGGACCCCGTACCGGGCGATGTACCAGTACAGGCCCCAGAACGAAGACGAG
CTGGAGCTGCGCGAGGGGGACAGGGTGGATGTCATGCAGCAGTGTGACGATGGCTGGTTTGTGGGTGTCT
CCCGGAGGACCCAGAAATTCGGAACGTTCCCTGGAAATTACGTTGCCCCGGTGTGA

Translation (671 aa):
MQGPPRSLRAGLSLDDFIPGHLQSHIGSSSRGTRVPVIRNGGSNTLNFQFHDPAPRTVCNGGYTPRRDAS
QHPDPAWYQTWPGPGSKPSASTKIPASQHTQNWSATWTKDSKRRDKRWVKYEGIGPVDESGMPIAPRSSV
DRPRDWYRRMFQQIHRKMPDLQLDWTFEEPPRDPRHLGAQQRPAHRPGPATSSSGRSWDHSEELPRSTFN
YRPGAFSTVLQPSNQVLRRREKVDNVWTEESWNQFLQELETGQRPKKPLVDDPGEKPSQPIEVLLERELA
ELSAELDKDLRAIETRLPSPKSSPAPRRAPEQRPPAGPASAWSSSYPHAPYLGSARSLSPHKMADGGSPF
LGRRDFVYPSSTRDPSASNGGGSPARREEKKRKAARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLEG
EHHGRLGIFPANYVEVLPADEIPKPIKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNEN
WYEGRITGTGRQGIFPASYVQVSREPRLRLCDDGPQLPTSPRLTAAARSARHPSSPSALRSPADPIDLGG
QTSPRRTGFSFPTQEPRPQTQNLGTPGPALSHSRGPSHPLDLGTSSPNTSQIHWTPYRAMYQYRPQNEDE
LELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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