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Report for CCDS58406.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58406.1 Public Homo sapiens 16 NOXO1 24 110 108 CCDS HistoryNCBI Gene:124056Re-query CCDS DB by CCDS ID:58406.1Re-query CCDS DB by GeneID:124056See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58406.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000566005.5 ENSP00000456800.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566005.5Link to Ensembl Protein Viewer:ENSP00000456800.1Re-query CCDS DB by Nucleotide ID:ENST00000566005Re-query CCDS DB by Protein ID:ENSP00000456800
Original member Current member NCBI NM_001267721.2 NP_001254650.1 Accepted alive Link to Nucleotide Sequence:NM_001267721.2Link to Protein Sequence:NP_001254650.1Re-query CCDS DB by Nucleotide ID:NM_001267721Re-query CCDS DB by Protein ID:NP_001254650Link to BLAST:NP_001254650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001254650.1 375 Q8NFA2-2 375 100% 0 0

Chromosomal Locations for CCDS 58406.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1979052 1979349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1979425 1979542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1979790 1979903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1979997 1980181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1980367 1980544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1980641 1980728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1980939 1981019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1981114 1981179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGGCAGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGT
TTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTGGGACGAATTCAGGCA
GCTCAAGACCCTCAAGGAGACCTTCCCGGTGGAGGCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCA
AAGCTTCTCGGTCAGGCCAGCCTGGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGG
CGCGCCTGCAGCTGTTGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGGAGCCC
GACGATCACTGGCTTCTTCGCACCGCAACCCCTGGACCTGGAGCCCGCGCTGCCACCCGGCAGCCGGGTG
ATCCTGCCCACCCCAGAGGAGCAGCCTCTTTCTCGCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGAGG
CTCAGAGCCTGCGCTGCCTGCAGCCCTTCTGTACCCAGGACACGCGGGATAGGCCTTTTCAGGCGCAGGC
CCAGGAGAGCCTGGACGTGCTGCTGCGGCACCCCTCAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAG
ACCGCCTGGTTTCCAGCGCCCTACCTGGAGGAGGCGGCCCCGGGCCAAGGCCGGGAGGGAGGCCCGTCCC
TAGGGAGCAGCGGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGT
GCCCGCGGGGGCGCGCGTGCGCGTGTTGGAAACGTCAGACCGCGGCTGGTGGCTATGCAGGTACGGCGAC
CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCTGAGCGGGACGGGGT
TCCGTGGAGGAGACGACCCGGCGGGTGAGGCCCGGGGCTTCCCTGAACCCTCCCAGGCCACCGCCCCTCC
CCCCACCGTGCCCACCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTGCACCGTCACACGCAGGGCC
CTGGAGCGGCGCCCACGGCGCCAGGGCCGCCCTCGAGGGTGCGTGGACTCTGTGCCGCACCCCACGACGG
AGCAGTGA

Translation (375 aa):
MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKTLKETFPVEAGLLRRSDRVLP
KLLGQASLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFAPQPLDLEPALPPGSRV
ILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQAQAQESLDVLLRHPSGWWLVENEDRQ
TAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGD
RAGLLPAVLLRPEGLGALLSGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRA
LERRPRRQGRPRGCVDSVPHPTTEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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