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Report for CCDS9853.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9853.2 Public Homo sapiens 14 LRRC74A 24 110 108 CCDS HistoryNCBI Gene:145497Re-query CCDS DB by CCDS ID:9853.2Re-query CCDS DB by GeneID:145497See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 9853.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393774.7 ENSP00000377369.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393774.7Link to Ensembl Protein Viewer:ENSP00000377369.3Re-query CCDS DB by Nucleotide ID:ENST00000393774Re-query CCDS DB by Protein ID:ENSP00000377369
Original member Current member NCBI NM_194287.3 NP_919263.2 Accepted alive Link to Nucleotide Sequence:NM_194287.3Link to Protein Sequence:NP_919263.2Re-query CCDS DB by Nucleotide ID:NM_194287Re-query CCDS DB by Protein ID:NP_919263Link to BLAST:NP_919263.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_919263.2 488 Q0VAA2-1 488 100% 0 0

Chromosomal Locations for CCDS 9853.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 76826496 76826583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76828291 76828419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76831203 76831375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76836207 76836314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76837875 76837971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76844423 76844472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76844820 76844901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76852365 76852450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76853216 76853410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76857380 76857475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76860693 76860839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76865968 76866075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76867356 76867438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76870125 76870149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGCACATCCAATTCCCATCAAAGCCTACTCTTCCCAGGGCTTGCTGGGAGGGAAGGATAACTGCAGGCT
CCCCTGGGATGCCCCCAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAATGCTCTACTG
TGAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCGGAAACAGACCTGGAG
ATTGAAGATGATGAGAAATTTTTCACCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGG
GTGTAGTGCCTGTCTCCTACTTCATTCGGAACATGGAGGAGTCCTACGTGAACCTCAACCACCACGGCCT
GGGCCCCAGGGGTACCAAGGCTATTGCTATAGCCCTGGTGTCCAACATGGCTGTTACCAAACTGGAGCTG
GAAGACAATTGCATCATGGAGGAGGGCGTCTTGAGCCTGGTGGAGATGCTACAAGAGAACTACTACCTCC
AGGAGATGAATATTTCCAACAATCACCTTGGTTTGGAGGGGGCCAGAATCATCTCAGATTTCTTTGAGAG
AAACAGTTCTTCTATCTGGAGCCTTGAGCTTTCAGGAAATGACTTCAAGGAAGACTCCGCAGCACTGCTC
TGCCAAGCCCTGTCGACCAATTACCAAATTAAAAAGCTGGATCTCAGTCACAACCAATTCTCTGATGTAG
GAGGGGAGCACCTGGGCCAGATGCTGGCCATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAA
CTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGAT
CTCTCCATGAATGGCTTTGGGAATGAGGTGGCTCTGGCCCTAGGGGAAGTCCTCCGACTCAACCGCTGCC
TGGTCTACCTGGATATCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
ATCCAATGAAAGCCTCAGAGTTCTGAAGCTTTTCCTGAATCCCATAAATATGGATGGGGCTATTTTACTT
ATCCTGGCTATCAAGAGGAACCCCAAATCCAGGATGGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCG
AGCAGTTCATGAAAACGTTGGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGT
ACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATGCA
GACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAATGAAGATGTCTG
TGGATGAGTTCCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGT
GATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTCAGTTTCTTGAACACGATGAAGCCATAG

Translation (488 aa):
MHIQFPSKPTLPRACWEGRITAGSPGMPPDEIEIEPVRQSSDKMLYCEAESPPTVEKVKPARENSETDLE
IEDDEKFFTTGQKELYLEACKLMGVVPVSYFIRNMEESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLEL
EDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALL
CQALSTNYQIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLD
LSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGAILL
ILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVVFKAVQGLSPKKTIFLLTNPMKLIQSYA
DQHKITIVDFFKSLNPTGTMKMSVDEFQKVMIEQNKVPLNQYQVREVIKKLDEKTGMVNFSFLNTMKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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