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Report for CCDS63229.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63229.1 Public Homo sapiens 20 BFSP1 24 110 108 CCDS HistoryNCBI Gene:631Re-query CCDS DB by CCDS ID:63229.1Re-query CCDS DB by GeneID:631See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63229.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536626.7 ENSP00000442522.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536626.7Link to Ensembl Protein Viewer:ENSP00000442522.1Re-query CCDS DB by Nucleotide ID:ENST00000536626Re-query CCDS DB by Protein ID:ENSP00000442522
Original member Current member NCBI NM_001278606.2 NP_001265535.1 Accepted alive Link to Nucleotide Sequence:NM_001278606.2Link to Protein Sequence:NP_001265535.1Re-query CCDS DB by Nucleotide ID:NM_001278606Re-query CCDS DB by Protein ID:NP_001265535Link to BLAST:NP_001265535.1
Original member Current member NCBI NM_001278608.2 NP_001265537.1 Accepted alive Link to Nucleotide Sequence:NM_001278608.2Link to Protein Sequence:NP_001265537.1Re-query CCDS DB by Nucleotide ID:NM_001278608Re-query CCDS DB by Protein ID:NP_001265537Link to BLAST:NP_001265537.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265535.1 526 Q12934-3 526 100% 0 0
NP_001265537.1 526 Q12934-3 526 100% 0 0

Chromosomal Locations for CCDS 63229.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 17494074 17495029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17496938 17497023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17498820 17499040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17508889 17508996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17511976 17512068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17514721 17514816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 17524848 17524868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1581 nt):
ATGCTTGAACGGCTTAACAAGGAAGCTGATGAAGCCTTGCTGCATAACCTACGCCTTCAGCTGGAAGCCC
AATTTCTGCAAGATGATATCAGTGCGGCAAAGGACAGGCACAAGAAGAATCTTCTGGAAGTTCAGACCTA
TATCAGCATCCTGCAGCAGATCATCCACACCACTCCTCCAGCATCCATTGTGACGAGTGGGATGAGGGAG
GAGAAGCTCCTGACGGAGCGGGAGGTGGCCGCCCTGCGGAGTCAGCTGGAGGAGGGCCGGGAGGTGCTCT
CCCACCTGCAGGCGCAGAGAGTGGAGCTGCAGGCACAGACAACAACTCTGGAACAAGCTATTAAAAGTGC
CCATGAGTGTTATGACGATGAGATTCAGCTTTATAACGAGCAGATTGAGACACTGCGCAAGGAGATTGAG
GAGACAGAGCGGGTCCTGGAGAAGTCTTCTTACGACTGCCGGCAGCTGGCGGTCGCCCAGCAAACCCTGA
AGAATGAGCTGGACCGGTATCATCGTATCATCGAGATTGAAGGCAACAGGCTGACCTCTGCCTTCATTGA
AACTCCCATTCCCCTGTTCACCCAGAGCCATGGAGTCTCTCTCAGCACTGGATCCGGTGGGAAAGATCTT
ACCAGAGCTCTGCAGGATATAACAGCAGCAAAACCAAGACAAAAAGCCCTCCCCAAGAATGTTCCAAGGA
GAAAAGAGATTATAACAAAAGACAAAACCAACGGAGCTCTGGAAGATGCACCATTAAAAGGTTTGGAAGA
CACAAAGCTGGTACAGGTGGTACTTAAAGAGGAAAGTGAATCTAAGTTTGAATCAGAAAGTAAAGAAGTA
AGTCCCCTGACACAAGAAGGGGCTCCAGAGGATGTGCCAGATGGAGGGCAGATAAGCAAAGGCTTTGGGA
AACTATACAGGAAGGTCAAGGAGAAAGTGAGAAGCCCCAAAGAGCCTGAGACCCCCACTGAGCTCTACAC
CAAAGAGCGGCACGTGCTGGTCACAGGGGATGCCAATTACGTGGACCCTAGATTCTATGTCTCCTCCATC
ACAGCTAAAGGTGGGGTGGCTGTTTCTGTTGCGGAAGACTCTGTGCTTTATGACGGCCAGGTGGAGCCCT
CTCCTGAGTCACCCAAGCCCCCTTTAGAGAATGGGCAGGTGGGTCTGCAGGAGAAAGAAGATGGACAACC
AATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGATGGTGCAGAGCTGGAAGGCCCTGAAGAGAAA
CGTGAGGGTGAGGAGCGGGACGAAGAGTCCAGGAGACCCTGTGCCATGGTCACACCCGGTGCAGAGGAAC
CATCTATACCTGAGCCTCCAAAGCCTGCGGCTGATCAGGATGGAGCTGAGGTGCTTGGGACTAGGAGCAG
AAGCCTGCCAGAAAAAGGCCCTCCCAAGGCTTTGGCCTATAAGACAGTGGAAGTGGTGGAATCTATCGAG
AAGATTTCCACGGAGAGCATTCAGACATATGAAGAAACCGCTGTGATCGTGGAGACCATGATTGGAAAGA
CAAAGTCAGACAAGAAGAAATCAGGAGAGAAGAGCTCTTAA

Translation (526 aa):
MLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQTYISILQQIIHTTPPASIVTSGMRE
EKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQTTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIE
ETERVLEKSSYDCRQLAVAQQTLKNELDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDL
TRALQDITAAKPRQKALPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEV
SPLTQEGAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSI
TAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKEIEPDGAELEGPEEK
REGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRSRSLPEKGPPKALAYKTVEVVESIE
KISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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