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Report for CCDS7775.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7775.1 Public Homo sapiens 11 ZNF215 24 110 108 CCDS HistoryNCBI Gene:7762Re-query CCDS DB by CCDS ID:7775.1Re-query CCDS DB by GeneID:7762See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7775.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278319.10 ENSP00000278319.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278319.10Link to Ensembl Protein Viewer:ENSP00000278319.5Re-query CCDS DB by Nucleotide ID:ENST00000278319Re-query CCDS DB by Protein ID:ENSP00000278319
Original member Current member EBI ENST00000414517.6 ENSP00000393202.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414517.6Link to Ensembl Protein Viewer:ENSP00000393202.2Re-query CCDS DB by Nucleotide ID:ENST00000414517Re-query CCDS DB by Protein ID:ENSP00000393202
Original member Current member NCBI NM_001354853.2 NP_001341782.1 Accepted alive Link to Nucleotide Sequence:NM_001354853.2Link to Protein Sequence:NP_001341782.1Re-query CCDS DB by Nucleotide ID:NM_001354853Re-query CCDS DB by Protein ID:NP_001341782Link to BLAST:NP_001341782.1
Original member Current member NCBI NM_013250.4 NP_037382.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013250.4Link to Protein Sequence:NP_037382.2Re-query CCDS DB by Nucleotide ID:NM_013250Re-query CCDS DB by Protein ID:NP_037382Link to BLAST:NP_037382.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341782.1 517 Q9UL58-1 517 100% 0 0
NP_037382.2 517 Q9UL58-1 517 100% 0 0

Chromosomal Locations for CCDS 7775.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6932273 6932672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6941571 6941653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6943083 6943215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6943546 6943641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6955690 6956531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGCAGCCTCTGAGCAAGTTGATGGCTATCTCAAAACCTCGAAACCTGTCTCTACGTGAACAAAGAGAGG
TTCTGAGAGCAGATATGTCTTGGCAGCAGGAAACCAACCCCGTCGTGGAGACACATGACTCTGAGGCATC
TCGTCAAAAGTTCAGACATTTCCAGTATTTGAAAGTGTCTGGGCCCCATGAAGCCCTGAGCCAACTCTGG
GAGCTCTGTCTTCAATGGCTGAGACCAGAGATTCATACAAAGAAGCAGATTATAGAACTGTTGGTGCTGG
AACAATTCCTGGCAATCCTGCCTGAAGAAGTCAGGACTTGGGTGAATTTACAACATCCAAACAACAGTAA
AGATATGGTGACCCTCATAGAAGATGTGATTGAAATGCTTGAAGATGAAGATATGCCCTGCAAGGACTCT
GCCCTGCAGATGGGGAGCATCAAGGAGAAAATGAAAGCTGGCTCACGAACAGGCAAACCACAGGAACCAG
TGACATTCAAAGATGTGGTTGTGGAATTCAGCAAGGAAGAGTGGGGGCAACTGGACTCTGCTGTAAAGAA
CCTGTACAGGAATGTGATGCTGGAAAACTTTAGGAACCTGAATTCATTGCGTAAAGCACATCTACTTTCC
AAACCATTTGAGAGCCTTAAGTTGGAGAGTAAGAAAAAAAGATGGATAATGGAGAAAGAAATACCAAGGA
AGACTATTTTTGACATGAAGAGTATTTCTGGAGAAGAATCATCCCATGGAGTGATTATGACAAGGCTTAC
CGAAAGTGGACACCCTTCTTCAGATGCCTGGAAAGGTGAGAATTGGTTATATAGGAACCAGAAAAAATGG
GACATAAATTTGCCACAAGAGGCTTTCATTCCTGAGACAATTTACACTGAGGAGGAAGATTTTGAATGTA
GTGAAAATAAGAAAAGCTTTGATATTAATTCAGTTAGCTCAATTTGTGCTATACAAGTGGGAATTCCTTC
AAGAAAGGGGTCTCCAAAATGTGATAAGTTTAAAACTTACTTCAAATTTAATTTAGACTCAGTAGGTAAG
CAACATTCAGAATATGAATATGGGAATGACTTGAGTTTGAGTACAGATATTCGACACCAAAAAAGTCATA
CTACAATGAATTCCTATGAATGTTATCAATGTGGGAAAGCCTTCTGCCGAAGTTCATCCCTTATTCGACA
TCAGATCATTCACACAGGAGAGAAACCCTATAAATGCAGTGAATGTGGGAGATTCTTCAACCGACGTACA
AACCTTACTAAGCATCAAAAACTTCATGCTGAAGCAAAGGCCTGCACAAGCAATAAATGTGGAAAGGCCT
TCAGTAAAAGTGAAGACAGTAATAATCCAACACTCCATTTTGGAAACAATTTCTATCAATGTGTTAACTG
TGGAAAATCCTTCAACCGGAGCTCCTCTCTTATTCGACACCAAATGATTCACACGGGAGAGAAACCATTC
AAATGTAAGGAATGTAGTAAAGCCTTCAACAGGAGTTCAAACCTTGTTAAACATCAAAAACTGCATACTC
GAGATAAGTCCTGA

Translation (517 aa):
MQPLSKLMAISKPRNLSLREQREVLRADMSWQQETNPVVETHDSEASRQKFRHFQYLKVSGPHEALSQLW
ELCLQWLRPEIHTKKQIIELLVLEQFLAILPEEVRTWVNLQHPNNSKDMVTLIEDVIEMLEDEDMPCKDS
ALQMGSIKEKMKAGSRTGKPQEPVTFKDVVVEFSKEEWGQLDSAVKNLYRNVMLENFRNLNSLRKAHLLS
KPFESLKLESKKKRWIMEKEIPRKTIFDMKSISGEESSHGVIMTRLTESGHPSSDAWKGENWLYRNQKKW
DINLPQEAFIPETIYTEEEDFECSENKKSFDINSVSSICAIQVGIPSRKGSPKCDKFKTYFKFNLDSVGK
QHSEYEYGNDLSLSTDIRHQKSHTTMNSYECYQCGKAFCRSSSLIRHQIIHTGEKPYKCSECGRFFNRRT
NLTKHQKLHAEAKACTSNKCGKAFSKSEDSNNPTLHFGNNFYQCVNCGKSFNRSSSLIRHQMIHTGEKPF
KCKECSKAFNRSSNLVKHQKLHTRDKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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