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Report for CCDS56488.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56488.1 Public Homo sapiens 7 NIPSNAP2 24 110 108 CCDS HistoryNCBI Gene:2631Re-query CCDS DB by CCDS ID:56488.1Re-query CCDS DB by GeneID:2631See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56488.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446778.5 ENSP00000406855.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446778.5Link to Ensembl Protein Viewer:ENSP00000406855.1Re-query CCDS DB by Nucleotide ID:ENST00000446778Re-query CCDS DB by Protein ID:ENSP00000406855
Original member Current member NCBI NM_001202469.2 NP_001189398.1 Accepted alive Link to Nucleotide Sequence:NM_001202469.2Link to Protein Sequence:NP_001189398.1Re-query CCDS DB by Nucleotide ID:NM_001202469Re-query CCDS DB by Protein ID:NP_001189398Link to BLAST:NP_001189398.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001189398.1 247 O75323-2 247 100% 0 0

Chromosomal Locations for CCDS 56488.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 55964610 55964701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55978126 55978265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55981473 55981567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55983728 55983868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55984847 55984878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55994894 55994988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55997366 55997449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55999008 55999072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGGCGGCGCGAGTGCTGCGCGCCCGCGGAGCGGCCTGGGCCGGCGGCCTCCTGCAGCGGGCGGCCCCCT
GCAGCCTCCTGCCCAGGCTCCGGACATGGACATCTTCCAGCAACAGATCTCGAGAAGACAGCTGGCTAAA
ATCCTTATTTGTCCGGAAAGTTGATCCAAGAAAAGATGCCCACTCCAATCTCCTAGCCAAAAAGGAAACA
AGCAATCTATACAAATTACAGTTCAAGAGGTGTTGCCAAAGATTCACGAAGATAAACACTACCCTTGTAC
TTTGGTGGGGACTTGGAACACGTGGTATGGCGAGCAGGACCAAGCTGGAATTTTTGGAATTTCGTAAGGC
AAGAAGTGACATGCTTCTCTCCAGGAAGAATCAGCTCCTGTTGGAGTTCAGTTTCTGGAATGAGCCTGTG
CCAAGATCCGGACCTAATATATATGAACTCAGGTCTTACCAACTCCGACCAGGAACCATGATTGAATGGG
GCAATTACTGGGCTCGTGCAATCCGCTTCAGACAGGATGGTAACGAAGCCGTCGGAGGATTCTTCTCTCA
GATTGGGCAGCTGTACATGGTGCACCATCTTTGGGCTTACAGGGATCTTCAGACCAGGGAAGACATACGG
AATGCAGCATGGCACAAACATGGCTGGGAGGAATTGGTATATTACACAGTTCCACTTATTCAGGAAATGG
AATCCAGAATCATGATCCCACTGAAGACCTCGCCCCTCCAGTAA

Translation (247 aa):
MAARVLRARGAAWAGGLLQRAAPCSLLPRLRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKET
SNLYKLQFKRCCQRFTKINTTLVLWWGLGTRGMASRTKLEFLEFRKARSDMLLSRKNQLLLEFSFWNEPV
PRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYRDLQTREDIR
NAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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