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Report for CCDS10775.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10775.1 Public Homo sapiens 16 RSPRY1 24 110 108 CCDS HistoryNCBI Gene:89970Re-query CCDS DB by CCDS ID:10775.1Re-query CCDS DB by GeneID:89970See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10775.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394420.9 ENSP00000377942.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394420.9Link to Ensembl Protein Viewer:ENSP00000377942.4Re-query CCDS DB by Nucleotide ID:ENST00000394420Re-query CCDS DB by Protein ID:ENSP00000377942
Original member Current member EBI ENST00000537866.5 ENSP00000443176.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537866.5Link to Ensembl Protein Viewer:ENSP00000443176.1Re-query CCDS DB by Nucleotide ID:ENST00000537866Re-query CCDS DB by Protein ID:ENSP00000443176
Original member Current member NCBI NM_001305163.2 NP_001292092.1 Accepted alive Link to Nucleotide Sequence:NM_001305163.2Link to Protein Sequence:NP_001292092.1Re-query CCDS DB by Nucleotide ID:NM_001305163Re-query CCDS DB by Protein ID:NP_001292092Link to BLAST:NP_001292092.1
Original member Current member NCBI NM_001305164.2 NP_001292093.1 Accepted alive Link to Nucleotide Sequence:NM_001305164.2Link to Protein Sequence:NP_001292093.1Re-query CCDS DB by Nucleotide ID:NM_001305164Re-query CCDS DB by Protein ID:NP_001292093Link to BLAST:NP_001292093.1
Original member Current member NCBI NM_133368.3 NP_588609.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133368.3Link to Protein Sequence:NP_588609.1Re-query CCDS DB by Nucleotide ID:NM_133368Re-query CCDS DB by Protein ID:NP_588609Link to BLAST:NP_588609.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001292092.1 576 Q96DX4-1 576 100% 0 0
NP_001292093.1 576 Q96DX4-1 576 100% 0 0
NP_588609.1 576 Q96DX4-1 576 100% 0 0

Chromosomal Locations for CCDS 10775.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57204659 57205008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57208058 57208110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57209075 57209187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57212972 57213098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57213888 57213946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57216107 57216173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57216904 57217035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57220732 57220847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57221272 57221415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57227342 57227453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57230711 57230813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57231167 57231319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57235124 57235228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57238879 57238975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1731 nt):
ATGATCGTCTTTGGTTGGGCCGTGTTCTTAGCGAGCAGAAGCCTTGGCCAGGGTCTGTTGTTGACTCTCG
AAGAGCACATAGCCCACTTCCTAGGGACTGGAGGTGCCGCTACTACCATGGGTAATTCCTGTATCTGCCG
AGATGACAGTGGAACAGATGACAGTGTTGACACCCAACAGCAACAGGCCGAGAACAGTGCAGTACCCACT
GCTGACACAAGGAGCCAACCACGGGACCCTGTTCGGCCACCAAGGAGGGGCCGAGGACCTCATGAGCCAA
GGAGAAAGAAACAAAATGTGGATGGGCTAGTGTTGGACACACTGGCAGTAATACGGACTCTTGTAGATAA
TGATCAGGAACCTCCCTATTCAATGATAACATTACACGAAATGGCAGAAACAGATGAAGGATGGTTGGAT
GTTGTCCAGTCTTTAATTAGAGTTATTCCACTGGAAGATCCACTGGGACCAGCTGTTATAACATTGTTAC
TAGATGAATGTCCATTGCCCACTAAAGATGCACTCCAGAAATTGACTGAAATTCTCAATTTAAATGGAGA
AGTAGCTTGCCAGGACTCAAGCCATCCTGCCAAACACAGGAACACATCTGCAGTCCTAGGCTGCTTGGCC
GAGAAACTAGCAGGTCCTGCAAGTATAGGTTTACTTAGCCCAGGAATACTGGAATACTTGCTACAGTGTC
TGAAGTTACAGTCCCACCCCACAGTCATGCTTTTTGCACTTATCGCACTGGAAAAGTTTGCACAGACAAG
TGAAAATAAATTGACTATTTCTGAATCCAGTATTAGTGACCGGCTTGTCACATTGGAGTCCTGGGCTAAT
GATCCTGATTATCTGAAACGTCAAGTTGGTTTCTGTGCCCAGTGGAGCTTAGACAATCTCTTTTTAAAAG
AAGGTAGACAGCTGACCTATGAGAAAGTGAACTTGAGTAGCATTAGGGCCATGCTGAATAGCAATGATGT
CAGCGAGTACCTGAAGATCTCACCTCATGGCTTAGAGGCTCGCTGTGATGCCTCCTCTTTTGAAAGTGTG
CGTTGCACCTTTTGTGTGGATGCCGGGGTATGGTACTATGAAGTAACAGTGGTCACTTCTGGCGTCATGC
AGATTGGCTGGGCCACTCGAGACAGCAAATTCCTCAATCATGAAGGCTACGGCATTGGGGATGATGAATA
CTCCTGTGCGTATGATGGCTGCCGGCAGCTGATTTGGTACAATGCCAGAAGTAAGCCTCACATACACCCA
TGCTGGAAAGAAGGAGATACAGTAGGATTTCTGTTAGACTTGAATGAAAAGCAAATGATCTTCTTTTTAA
ATGGCAACCAGCTGCCTCCTGAAAAGCAAGTCTTTTCATCTACTGTATCTGGATTTTTTGCTGCAGCTAG
TTTCATGTCATATCAACAATGTGAGTTCAATTTTGGAGCAAAACCATTCAAATACCCACCATCTATGAAA
TTTAGCACTTTTAATGACTACGCCTTCCTAACAGCTGAAGAAAAAATCATTTTGCCAAGGCACAGGCGTC
TTGCTCTGTTGAAGCAAGTCAGTATCCGAGAAAACTGCTGTTCCCTTTGTTGTGATGAGGTAGCAGACAC
ACAATTGAAGCCATGTGGACACAGTGACCTGTGCATGGATTGTGCCTTGCAGCTGGAGACCTGCCCATTG
TGTCGTAAAGAAATAGTATCTAGAATCAGACAGATTTCTCATATTTCATGA

Translation (576 aa):
MIVFGWAVFLASRSLGQGLLLTLEEHIAHFLGTGGAATTMGNSCICRDDSGTDDSVDTQQQQAENSAVPT
ADTRSQPRDPVRPPRRGRGPHEPRRKKQNVDGLVLDTLAVIRTLVDNDQEPPYSMITLHEMAETDEGWLD
VVQSLIRVIPLEDPLGPAVITLLLDECPLPTKDALQKLTEILNLNGEVACQDSSHPAKHRNTSAVLGCLA
EKLAGPASIGLLSPGILEYLLQCLKLQSHPTVMLFALIALEKFAQTSENKLTISESSISDRLVTLESWAN
DPDYLKRQVGFCAQWSLDNLFLKEGRQLTYEKVNLSSIRAMLNSNDVSEYLKISPHGLEARCDASSFESV
RCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKPHIHP
CWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMK
FSTFNDYAFLTAEEKIILPRHRRLALLKQVSIRENCCSLCCDEVADTQLKPCGHSDLCMDCALQLETCPL
CRKEIVSRIRQISHIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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