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Report for CCDS63408.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63408.1 Public Homo sapiens 22 RANBP1 24 110 108 CCDS HistoryNCBI Gene:5902Re-query CCDS DB by CCDS ID:63408.1Re-query CCDS DB by GeneID:5902See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63408.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402752.5 ENSP00000384925.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402752.5Link to Ensembl Protein Viewer:ENSP00000384925.1Re-query CCDS DB by Nucleotide ID:ENST00000402752Re-query CCDS DB by Protein ID:ENSP00000384925
Original member Current member NCBI NM_001278640.2 NP_001265569.1 Accepted alive Link to Nucleotide Sequence:NM_001278640.2Link to Protein Sequence:NP_001265569.1Re-query CCDS DB by Nucleotide ID:NM_001278640Re-query CCDS DB by Protein ID:NP_001265569Link to BLAST:NP_001265569.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265569.1 200 P43487-2 200 100% 0 0

Chromosomal Locations for CCDS 63408.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 20117650 20117664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20119013 20119149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20122264 20122421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20125308 20125436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20126303 20126368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20126955 20127052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (603 nt):
ATGGCGGCCGCCAAGGACACTCATGAGGACCATGATACTTCCACTGAGAATACAGACGAGTCCAACCATG
ACCCTCAGTTTGAGCCAATAGTTTCTCTTCCTGAGCAAGAAATTAAAACACTGGAAGAAGATGAAGAGGA
ACTTTTTAAAATGCGGGCAAAACTGTTCCGATTTGCCTCTGAGAACGATCTCCCAGAATGGAAGGAGCGA
GGCACTGGTGACGTCAAGCTCCTGAAGCACAAGGAGAAAGGGGCCATCCGCCTCCTCATGCGGAGGGACA
AGACCCTGAAGATCTGTGCCAACCACTACATCACGCCGATGATGGAGCTGAAGCCCAACGCAGGTAGCGA
CCGTGCCTGGGTCTGGAACACCCACGCTGACTTCGCCGACGAGTGCCCCAAGCCAGAGCTGCTGGCCATC
CGCTTCCTGAATGCTGAGAATGCACAGAAATTCAAAACAAAGTTTGAAGAATGCAGGAAAGAGATCGAAG
AGAGAGAAAAGAAAGGATCAGGCAAAAATGATCATGCCGAAAAAGTGGCGGAAAAGCTAGAAGCTCTCTC
GGTGAAGGAGGAGACCAAGGAGGATGCTGAGGAGAAGCAATAA

Translation (200 aa):
MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKER
GTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI
RFLNAENAQKFKTKFEECRKEIEEREKKGSGKNDHAEKVAEKLEALSVKEETKEDAEEKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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