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Report for CCDS77747.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77747.1 Public Homo sapiens 3 ZMYND10 24 110 108 CCDS HistoryNCBI Gene:51364Re-query CCDS DB by CCDS ID:77747.1Re-query CCDS DB by GeneID:51364See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77747.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360165.7 ENSP00000353289.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360165.7Link to Ensembl Protein Viewer:ENSP00000353289.3Re-query CCDS DB by Nucleotide ID:ENST00000360165Re-query CCDS DB by Protein ID:ENSP00000353289
Original member Current member NCBI NM_001308379.2 NP_001295308.1 Accepted alive Link to Nucleotide Sequence:NM_001308379.2Link to Protein Sequence:NP_001295308.1Re-query CCDS DB by Nucleotide ID:NM_001308379Re-query CCDS DB by Protein ID:NP_001295308Link to BLAST:NP_001295308.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295308.1 435 O75800-2 435 100% 0 0

Chromosomal Locations for CCDS 77747.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 50341410 50341485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50341574 50341699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50341810 50341931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50342015 50342140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50342397 50342655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50343118 50343206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50343307 50343444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50343563 50343616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50343734 50343850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50345124 50345232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50345488 50345579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1308 nt):
ATGGGAGACCTGGAACTGCTGCTGCCCGGGGAAGCTGAAGTGCTGGTGCGGGGTCTGCGCAGCTTCCCGC
TACGCGAGATGGGCTCCGAAGGGTGGAACCAGCAGCATGAGAACCTGGAGAAGCTGAACATGCAAGCCAT
CCTCGATGCCACAGTCAGCCAGGGCGAGCCCATTCAGGAGCTGCTGGTCACCCATGGGAAGGTCCCAACA
CTGGTGGAGGAGCTGATCGCAGTGGAGATGTGGAAGCAGAAGGTGTTCCCTGTGTTCTGCAGGGTGGAGG
ACTTCAAGCCCCAGAACACCTTCCCCATCTACATGGTGGTGCACCACGAGGCCTCCATCATCAACCTCTT
GGAGACAGTGTTCTTCCACAAGGAGGTGTGTGAGTCAGCAGAAGACACTGTCTTGGACTTGGTAGACTAT
TGCCACCGCAAACTGACCCTGCTGGTGGCCCAGAGTGGCTGTGGTGGCCCCCCTGAGGGGGAGGGATCCC
AGGACAGCAACCCCATGCAGGAGCTGCAGAAGCAGGCAGAGCTGATGGAATTTGAGATTGCACTGAAGGC
CCTCTCAGTACTACGCTACATCACAGACTGTGTGGACAGGCAGTGGTCAGTCTCCCAGCCCCCACAGCTG
GCTCACTTGAAGAGAATTCAACGTCTGCACCCAGTGTGCTGGTTCCTCTCCCCAGGCAAGCTGCAGCAGT
TCGAGGGCAGCCGTTGGCATACTGTGGCCCCCTCAGAGCAGCAAAAGCTGAGCAAGTTGGACGGGCAAGT
GTGGATCGCCCTGTACAACCTGCTGCTAAGCCCTGAGGCTCAGGCGCGCTACTGCCTCACAAGTTTTGCC
AAGGGACGGCTACTCAAGCTTCGGGCCTTCCTCACAGACACACTGCTGGACCAGCTGCCCAACCTGGCCC
ACTTGCAGAGTTTCCTGGCCCATCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGACCTGGTGTTGGA
ACAGATCCCAGAAATCTGGGAGCGGCTGGAGCGAGAAAACAGAGGCAAGTGGCAGGCAATTGCCAAGCAC
CAGCTCCAGCATGTGTTCAGCCCCTCAGAGCAGGACCTGCGGCTGCAGGCGCGAAGGTGGGCTGAGACCT
ACAGGCTGGATGTGCTAGAGGCAGTGGCTCCAGAGCGGCCCCGCTGTGCTTACTGCAGTGCAGAGGCTTC
TAAGCGCTGCTCACGATGCCAGAATGAGTGGTATTGCTGCAGGGAGTGCCAAGTCAAGCACTGGGAAAAG
CATGGAAAGACTTGTGTCCTGGCAGCCCAGGGTGACAGAGCCAAATGA

Translation (435 aa):
MGDLELLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQELLVTHGKVPT
LVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETVFFHKEVCESAEDTVLDLVDY
CHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELMEFEIALKALSVLRYITDCVDRQWSVSQPPQL
AHLKRIQRLHPVCWFLSPGKLQQFEGSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFA
KGRLLKLRAFLTDTLLDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKH
QLQHVFSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEK
HGKTCVLAAQGDRAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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