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Report for CCDS94317.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94317.1 Public Homo sapiens 8 GDAP1 24 110 108 CCDS HistoryNCBI Gene:54332Re-query CCDS DB by CCDS ID:94317.1Re-query CCDS DB by GeneID:54332See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94317.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000676207.1 ENSP00000502638.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676207.1Link to Ensembl Protein Viewer:ENSP00000502638.1Re-query CCDS DB by Nucleotide ID:ENST00000676207Re-query CCDS DB by Protein ID:ENSP00000502638
Original member Current member NCBI NM_001362931.2 NP_001349860.1 Accepted alive Link to Nucleotide Sequence:NM_001362931.2Link to Protein Sequence:NP_001349860.1Re-query CCDS DB by Nucleotide ID:NM_001362931Re-query CCDS DB by Protein ID:NP_001349860Link to BLAST:NP_001349860.1

Chromosomal Locations for CCDS 94317.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 74350462 74350578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74351274 74351466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74360137 74360310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74361884 74361978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74362939 74363053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74488678 74488775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGGCTGAGAGGCAGGAAGAGCAGAGAGGGAGCCCGCCCTTGAGGGCGGAAGGCAAGGCCGACGCGGAGG
TTAAGCTCATTCTGTACCATTGGACGCATTCCTTCAGCTCTCAAAAGGTGCGCTTGGTAATTGCTGAAAA
GGCATTGAAGTGCGAGGAACATGATGTAAGTCTGCCCTTGAGTGAGCACAATGAGCCTTGGTTTATGCGT
TTGAACTCAACTGGAGAAGTGCCTGTCCTTATCCACGGGGAAAACATAATTTGTGAGGCCACTCAGATCA
TTGATTATCTTGAACAGACTTTCCTGGATGAAAGAACACCCAGGTTAATGCCTGATAAAGAAAGCATGTA
TTACCCACGGGTACAACATTACCGAGAGCTGCTTGACTCCTTGCCAATGGATGCCTATACACATGGCTGC
ATTTTACATCCTGAGTTAACTGTGGACTCCATGATCCCGGCTTATGCAACTACAAGGATTCGTAGCCAAA
TTGGAAACACAGAGTCTGAGCTGAAGAAACTTGCTGAAGAAAACCCAGATTTACAAGAAGCATACATTGC
AAAACAGAAACGACTTAAATCAAAGCTGCTTGATCATGACAATGTCAAGTATTTGAAGAAAATTCTTGAT
GAGTTGGAGAAAGTCTTGGATCAGGTTGAAACTGAATTGCAAAGAAGAAATGAAGAAACCCCAGCTTCTC
ATATGCAGCATACTGGTGGAAGAACAGCTCACCTGGTGCCAAAGACAACAGTGGACTTGGCAGAGCTTGC
TGCCTTGACAGTGTATCAATAG

Translation (263 aa):
MAERQEEQRGSPPLRAEGKADAEVKLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMR
LNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGC
ILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILD
ELEKVLDQVETELQRRNEETPASHMQHTGGRTAHLVPKTTVDLAELAALTVYQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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