NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS8715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8715.1 Public Homo sapiens 12 PTHLH 24 110 108 CCDS HistoryNCBI Gene:5744Re-query CCDS DB by CCDS ID:8715.1Re-query CCDS DB by GeneID:5744See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000201015.8 ENSP00000201015.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000201015.8Link to Ensembl Protein Viewer:ENSP00000201015.4Re-query CCDS DB by Nucleotide ID:ENST00000201015Re-query CCDS DB by Protein ID:ENSP00000201015
Original member Current member EBI ENST00000395868.7 ENSP00000379209.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395868.7Link to Ensembl Protein Viewer:ENSP00000379209.3Re-query CCDS DB by Nucleotide ID:ENST00000395868Re-query CCDS DB by Protein ID:ENSP00000379209
Original member Current member EBI ENST00000535992.5 ENSP00000440613.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535992.5Link to Ensembl Protein Viewer:ENSP00000440613.1Re-query CCDS DB by Nucleotide ID:ENST00000535992Re-query CCDS DB by Protein ID:ENSP00000440613
Original member Current member NCBI NM_002820.3 NP_002811.1 Accepted alive Link to Nucleotide Sequence:NM_002820.3Link to Protein Sequence:NP_002811.1Re-query CCDS DB by Nucleotide ID:NM_002820Re-query CCDS DB by Protein ID:NP_002811Link to BLAST:NP_002811.1
Original member Current member NCBI NM_198964.2 NP_945315.1 Accepted alive Link to Nucleotide Sequence:NM_198964.2Link to Protein Sequence:NP_945315.1Re-query CCDS DB by Nucleotide ID:NM_198964Re-query CCDS DB by Protein ID:NP_945315Link to BLAST:NP_945315.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002811.1 175 P12272-2 175 100% 0 0
NP_945315.1 175 P12272-2 175 100% 0 0

Chromosomal Locations for CCDS 8715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 27963344 27963770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 27969394 27969494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGCAGCGGAGACTGGTTCAGCAGTGGAGCGTCGCGGTGTTCCTGCTGAGCTACGCGGTGCCCTCCTGCG
GGCGCTCGGTGGAGGGTCTCAGCCGCCGCCTCAAAAGAGCTGTGTCTGAACATCAGCTCCTCCATGACAA
GGGGAAGTCCATCCAAGATTTACGGCGACGATTCTTCCTTCACCATCTGATCGCAGAAATCCACACAGCT
GAAATCAGAGCTACCTCGGAGGTGTCCCCTAACTCCAAGCCCTCTCCCAACACAAAGAACCACCCCGTCC
GATTTGGGTCTGATGATGAGGGCAGATACCTAACTCAGGAAACTAACAAGGTGGAGACGTACAAAGAGCA
GCCGCTCAAGACACCTGGGAAGAAAAAGAAAGGCAAGCCCGGGAAACGCAAGGAGCAGGAAAAGAAAAAA
CGGCGAACTCGCTCTGCCTGGTTAGACTCTGGAGTGACTGGGAGTGGGCTAGAAGGGGACCACCTGTCTG
ACACCTCCACAACGTCGCTGGAGCTCGATTCACGGTAA

Translation (175 aa):
MQRRLVQQWSVAVFLLSYAVPSCGRSVEGLSRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTA
EIRATSEVSPNSKPSPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKK
RRTRSAWLDSGVTGSGLEGDHLSDTSTTSLELDSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH