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Report for CCDS67042.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
67042.1 Public Homo sapiens 16 CNGB1 24 110 108 CCDS HistoryNCBI Gene:1258Re-query CCDS DB by CCDS ID:67042.1Re-query CCDS DB by GeneID:1258See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 67042.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000564448.5 ENSP00000454633.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000564448.5Link to Ensembl Protein Viewer:ENSP00000454633.1Re-query CCDS DB by Nucleotide ID:ENST00000564448Re-query CCDS DB by Protein ID:ENSP00000454633
Original member Current member NCBI NM_001286130.2 NP_001273059.1 Accepted alive Link to Nucleotide Sequence:NM_001286130.2Link to Protein Sequence:NP_001273059.1Re-query CCDS DB by Nucleotide ID:NM_001286130Re-query CCDS DB by Protein ID:NP_001273059Link to BLAST:NP_001273059.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273059.1 1245 Q14028-4 1245 100% 0 0

Chromosomal Locations for CCDS 67042.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57884164 57884457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57887855 57888074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57897397 57897543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57897796 57897914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57901352 57901435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57901528 57901625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57903822 57903981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57904734 57904875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57911753 57911875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57912930 57912994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57915249 57915335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57916129 57916179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57917268 57917476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57919099 57919254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57920387 57920544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57923273 57923380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57931716 57931878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57939430 57939592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57940234 57940321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57949353 57949439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57950381 57950540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57957341 57957377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57958410 57958485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57959888 57960065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57960500 57960530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57960840 57960915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57962565 57962610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57962842 57962872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57962974 57963064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57964130 57964202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57964487 57964544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57967128 57967286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3738 nt):
ATGTTGGGCTGGGTCCAGAGGGTGCTGCCTCAGCCCCCAGGGACCCCTCGGAAGACCAAGATGCAGGAGG
AAGAGGAAGTGGAACCAGAGCCAGAGATGGAGGCGGAGGTGGAACCAGAACCGAATCCTGAGGAGGCCGA
GACAGAGTCCGAGTCCATGCCCCCCGAAGAGTCATTCAAGGAGGAGGAAGTGGCTGTGGCAGACCCAAGC
CCTCAGGAGACCAAGGAGGCTGCCCTTACTTCCACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTCTG
AAATGAATAGTCCCAGCCGCAGGGTACTGACCTGGCTCATGAAGGGCGTAGAGAAGGTGATCCCGCAGCC
TGTTCACAGCATCACGGAGGACCCGGCTCAGATCCTGGGGCATGGCAGCACTGGGGACACAGGGTGCACA
GATGAACCCAATGAGGCCCTTGAGGCCCAAGACACTAGGCCTGGGCTGCGGCTGCTTCTGTGGCTGGAGC
AGAATCTGGAAAGAGTGCTTCCTCAGCCCCCCAAATCCTCTGAGGTCTGGAGAGATGAGCCTGCAGTTGC
TACAGCGCCTCCAGGACGCCCCCAGGAAATGGGGCCCAAGCTGCAGGCCCGGGAGACCCCCTCCCTGCCC
ACACCCATCCCCCTGCAGCCCAAGGAGGAACCCAAGGAGGCACCAGCTCCAGAGCCCCAGCCCGGCTCCC
AGGCCCAGACCTCCTCCCTGCCACCAACCAGGGACCCTGCCAGGCTGGTGGCATGGGTCCTGCACAGGCT
GGAGATGGCCTTGCCGCAGCCAGTGCTACATGGGAAAATAGGGGAACAGGAGCCTGACTCCCCTGGGATA
TGTGATGTGCAGACCATCAGCATCCTTCCTGGAGGACAAGTGGAGCCTGACCTTGTCCTAGAGGAGGTTG
AACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAGCCCACAGGGTACAGAGGTGGTTCCAGCTTA
TGAAGAAGAGAACAAAGCTGTGGAGAAGATGCCCAGAGAGCTGTCCCGGATTGAAGAGGAGAAAGAAGAT
GAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGTGACTGAGGTGCTGCTGGATAGCT
GTGTGGTGTCGCAGGTGGGCGTGGGCCAGAGTGAAGAAGACGGGACCCGGCCCCAGAGCACTTCAGATCA
GAAGCTGTGGGAGGAAGTTGGGGAGGAGGCCAAGAAGGAGGCTGAAGAGAAGGCCAAGGAGGAGGCCGAG
GAGGTGGCTGAAGAGGAGGCTGAAAAGGAGCCCCAGGACTGGGCGGAGACCAAGGAGGAGCCTGAGGCTG
AGGCCGAGGCTGCCAGTTCAGGAGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAAGATACTGA
TGCTGATAGCTGCCCCCTCATGGCAGAAGAGAATCCACCCTCAACCGTGTTGCCGCCACCGTCTCCTGCC
AAATCAGACACCCTTATAGTCCCAAGCTCAGCCTCGGGGACACACAGGAAGAAGCTGCCCTCTGAGGATG
ATGAGGCTGAAGAGCTCAAGGCGTTGTCACCAGCAGAGTCCCCAGTGGTTGCCTGGTCTGACCCCACCAC
CCCGAAGGACACTGATGGCCAGGACCGTGCGGCCTCCACGGCCAGCACAAATAGCGCCATCATCAACGAC
CGGCTCCAGGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGAAAGTGAAGGAGAAACTCATTGACCCTG
ACGTCACCTCTGATGAGGAGAGCCCCAAGCCCTCCCCAGCCAAGAAAGCCCCAGAGCCAGCTCCAGACAC
AAAGCCCGCTGAAGCCGAGCCAGTGGAAGAGGAGCACTATTGCGACATGCTCTGCTGCAAGTTCAAACAC
CGCCCCTGGAAGAAGTACCAGTTTCCCCAGAGCATTGACCCGCTGACCAACCTGATGTATGTCCTATGGC
TGTTCTTCGTGGTGATGGCCTGGAATTGGAACTGTTGGCTGATTCCCGTGCGCTGGGCCTTCCCCTACCA
GACCCCGGACAACATCCACCACTGGCTGCTGATGGATTACCTATGCGACCTCATCTACTTCCTGGACATC
ACCGTGTTCCAGACACGCCTGCAGTTTGTCAGAGGCGGGGACATCATTACGGACAAAAAGGACATGCGAA
ATAACTACCTGAAGTCTCGCCGCTTCAAGATGGACCTGCTCAGCCTCCTGCCCTTGGATTTTCTCTATTT
GAAAGTCGGTGTGAACCCCCTCCTCCGCCTGCCCCGCTGTTTAAAGTACATGGCCTTCTTCGAGTTTAAC
AGCCGCCTGGAATCCATCCTCAGCAAAGCCTACGTGTACAGGGTCATCAGGACCACAGCCTACCTTCTCT
ACAGCCTGCATTTGAATTCCTGTCTTTATTACTGGGCATCGGCCTATCAGGGCCTCGGCTCCACTCACTG
GGTTTACGATGGCGTGGGAAACAGTTATATTCGCTGTTACTACTTTGCTGTGAAGACCCTCATCACCATC
GGGGGGCTGCCTGACCCCAAGACACTCTTTGAAATTGTCTTCCAGCTGCTGAATTATTTCACGGGCGTCT
TTGCTTTCTCTGTGATGATCGGACAGATGAGAGATGTGGTAGGGGCCGCCACCGCCGGACAGACCTACTA
CCGCAGCTGCATGGACAGCACGGTGAAGTACATGAATTTCTACAAGATCCCCAAGTCCGTGCAGAACCGC
GTCAAGACCTGGTACGAGTACACCTGGCACTCGCAAGGCATGCTGGATGAGTCAGAGCTGATGGTGCAGC
TTCCAGACAAGATGCGGCTGGACCTCGCCATCGACGTGAACTACAACATCGTTAGCAAAGTCGCACTCTT
TCAGGGCTGTGACCGGCAGATGATCTTTGACATGCTGAAGAGGCTTCGCTCTGTTGTCTACCTGCCCAAC
GACTATGTGTGCAAGAAGGGGGAGATCGGCCGTGAGATGTACATCATCCAGGCAGGGCAAGTGCAGGTCT
TGGGCGGCCCTGATGGGAAATCTGTGCTGGTGACGCTGAAAGCTGGATCTGTGTTTGGAGAAATAAGCTT
GCTGGCTGTTGGGGGCGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGGGTTTACCAACCTCTTCATC
CTGGATAAGAAGGACCTGAATGAGATTTTGGTGCATTATCCTGAGTCTCAGAAGTTACTCCGGAAGAAAG
CCAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGGAGGAGAAGAGCGTGCTGATCCTTCCACCCCGGGC
GGGCACCCCAAAGCTCTTCAACGCTGCCCTCGCTATGACAGGAAAGATGGGTGGCAAGGGGGCAAAAGGC
GGCAAACTTGCTCACCTCCGGGCCCGGCTCAAAGAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGCAAG
AGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCA
CACGCACCCAAAGGAGGCCGCCACCGACCCACCCGCGCCCCGGACGCCCCCCGAGCCCCCGGGGTCTCCA
CCGAGCTCTCCACCGCCTGCCTCCCTTGGGAGGCCGGAGGGAGAGGAGGAGGGGCCGGCCGAGCCCGAAG
AGCACTCGGTGAGGATCTGCATGAGCCCGGGCCCGGAGCCGGGAGAGCAGATCCTGTCGGTGAAGATGCC
GGAGGAAAGGGAGGAGAAGGCGGAGTAA

Translation (1245 aa):
MLGWVQRVLPQPPGTPRKTKMQEEEEVEPEPEMEAEVEPEPNPEEAETESESMPPEESFKEEEVAVADPS
PQETKEAALTSTISLRAQGAEISEMNSPSRRVLTWLMKGVEKVIPQPVHSITEDPAQILGHGSTGDTGCT
DEPNEALEAQDTRPGLRLLLWLEQNLERVLPQPPKSSEVWRDEPAVATAPPGRPQEMGPKLQARETPSLP
TPIPLQPKEEPKEAPAPEPQPGSQAQTSSLPPTRDPARLVAWVLHRLEMALPQPVLHGKIGEQEPDSPGI
CDVQTISILPGGQVEPDLVLEEVEPPWEDAHQDVSTSPQGTEVVPAYEEENKAVEKMPRELSRIEEEKED
EEEEEEEEEEEEEEEVTEVLLDSCVVSQVGVGQSEEDGTRPQSTSDQKLWEEVGEEAKKEAEEKAKEEAE
EVAEEEAEKEPQDWAETKEEPEAEAEAASSGVPATKQHPEVQVEDTDADSCPLMAEENPPSTVLPPPSPA
KSDTLIVPSSASGTHRKKLPSEDDEAEELKALSPAESPVVAWSDPTTPKDTDGQDRAASTASTNSAIIND
RLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPAPDTKPAEAEPVEEEHYCDMLCCKFKH
RPWKKYQFPQSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPDNIHHWLLMDYLCDLIYFLDI
TVFQTRLQFVRGGDIITDKKDMRNNYLKSRRFKMDLLSLLPLDFLYLKVGVNPLLRLPRCLKYMAFFEFN
SRLESILSKAYVYRVIRTTAYLLYSLHLNSCLYYWASAYQGLGSTHWVYDGVGNSYIRCYYFAVKTLITI
GGLPDPKTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPKSVQNR
VKTWYEYTWHSQGMLDESELMVQLPDKMRLDLAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPN
DYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFI
LDKKDLNEILVHYPESQKLLRKKARRMLRSNNKPKEEKSVLILPPRAGTPKLFNAALAMTGKMGGKGAKG
GKLAHLRARLKELAALEAAAKQQELVEQAKSSQDVKGEEGSAAPDQHTHPKEAATDPPAPRTPPEPPGSP
PSSPPPASLGRPEGEEEGPAEPEEHSVRICMSPGPEPGEQILSVKMPEEREEKAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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