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Report for CCDS74122.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74122.1 Public Homo sapiens 17 MARCHF10 24 110 108 CCDS HistoryNCBI Gene:162333Re-query CCDS DB by CCDS ID:74122.1Re-query CCDS DB by GeneID:162333See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74122.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544856.6 ENSP00000443746.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544856.6Link to Ensembl Protein Viewer:ENSP00000443746.2Re-query CCDS DB by Nucleotide ID:ENST00000544856Re-query CCDS DB by Protein ID:ENSP00000443746
Original member Current member NCBI NM_001288780.2 NP_001275709.1 Accepted alive Link to Nucleotide Sequence:NM_001288780.2Link to Protein Sequence:NP_001275709.1Re-query CCDS DB by Nucleotide ID:NM_001288780Re-query CCDS DB by Protein ID:NP_001275709Link to BLAST:NP_001275709.1

Chromosomal Locations for CCDS 74122.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 62705507 62705581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62711231 62711344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62722488 62722597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62724938 62725104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62735931 62737332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62744376 62744525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62759835 62760006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62788480 62788599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62801646 62801735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2400 nt):
ATGTTGCATGACGCAAGGGACAGGCAGAAGTTCTTCAGCGATGTTCAGTATCTGCGGGACATGCAGCATA
AGGTGGACTCTGAGTATCAGGCTTGTCTGAGACGACAGGAATATAGAAGAGACCCAAATGAGAAGAAACG
CGATCAGTTTTGGGGGCAAGAGACAAGTTTTGAGAGATCCCGGTTTTCTAGCAGGTCATCTTCCAAACAG
AGTTCTAGTGAGGAGGATGCTCTAACTGAACCAAGGTCATCTATCAAGATATCTGCATTTAAGTGTGACT
CCAAACTTCCAGCAATTGACCAAACATCAGTCAAGCAGAAACATAAAAGTACCATGACTGTAAGGAAAGC
AGAGAAAGTGGACCCCAGCGAACCCTCTCCAGACCAAGCACCAATGGTTTTATTAAGAAAGAGGAAGCCA
AACCTGAGGAGATTTACAGTCAGCCCAGAATCGCACAGCCCGAGAGCATCTGGGGACAGAAGCAGACAGA
AACAGCAGTGGCCTGCAAAGGTGCCGGTTCCCAGGGGAGCAGATCAAGTAGTTCAACAAGAAGGCCTGAT
GTGTAACACTAAGCTGAAGAGGCCAAATCAAGAGAGAAGAAACTTGGTCCCATCGTCACAGCCAATGACT
GAGAACGCCCCTGATAGAGCCAAAAAAGGAGACCCGAGTGCTCCTTCCCAGAGTGAGCTGCATCCAGCCC
TGTCCCAGGCCTTCCAAGGAAAAAATAGTCCTCAAGTATTGAGTGAGTTCTCGGGGCCACCACTCACACC
CACCACTGTAGGAGGGCCAAGAAAGGCATCATTTAGGTTCCGAGATGAAGACTTTTATTCCATTTTGTCA
TTGAACAGCAGAAGAGAAAGCGATGACACTGAAGAGGAAACCCAGTCTGAAGAATGTCTGTGGGTTGGTG
TGCGCTCACCCTGTTCTCCTTCCCATCACAAAAGAAGTAGATTTGGGGGGACATCGACCCCTCAGGCCAA
AAATAAAAATTTTGAAGAAAATGCTGAAAATTGCAGAGGTCATTCTTCAAGAAGAAGTGAGCCCAGTCAT
GGCTCATTGAGAATAAGCAATGCAATGGAGCCAGCAACAGAGCGGCCTTCTGCTGGGCAAAGGTTGTCCC
AAGACCCCGGGCTGCCTGATAGGGAATCTGCTACAGAGAAGGACAGAGGTGGCAGTGAAAATGCGAAAAA
GAGCCCTCTTTCGTGGGACACCAAATCCGAGCCCAGACAAGAGGTTGGTGTCAATGCTGAAAATGTATGG
AGTGATTGTATTTCTGTGGAACATAGGCCTGGCACCCATGATTCTGAAGGATACTGGAAAGACTATTTAA
ACAGTTCTCAAAATTCTCTTGACTACTTTATTTCTGGCAGACCAATATCTCCAAGATCATCAGTGAATTC
ATCCTATAACCCTCCTGCATCATTCATGCATTCTGCTCTGAGAGATGATATTCCAGTAGACTTGTCAATG
TCATCGACTTCAGTTCACAGCTCAGACTCAGAGGGAAACTCAGGGTTTCATGTTTGCCAACCACTGTCTC
CCATTAGAAATAGGACTCCATTTGCCAGTGCCGAAAACCATAATTATTTCCCAGTAAACAGTGCACACGA
ATTTGCTGTCAGGGAAGCAGAAGATACTACTTTAACAAGCCAGCCTCAGGGGGCTCCACTATATACAGAT
CTCTTACTAAATCCACAGGGCAATTTGTCCTTAGTGGATTCTTCCAGCTCCTCTCCATCAAGAATGAACT
CAGAAGGCCATTTGCATGTGTCTGGGTCTCTGCAAGAAAATACACCATTTACTTTCTTTGCAGTGTCTCA
TTTCCCAAATCAAAATGATAATGGGAGCAGGATGGCAGCCTCTGGTTTCACAGATGAAAAGGAAACCAGT
AAGATAAAGGCAGACCCTGAGAAACTCAAGAAATTGCAAGAAAGTCTCCTGGAGGAGGACTCCGAGGAGG
AGGGAGACTTGTGTCGCATCTGTCAGATAGCCGGGGGTTCCCCAAGCAACCCCCTCCTGGAGCCTTGCGG
CTGTGTGGGAAGCCTGCAGTTTGTTCATCAAGAGTGCCTGAAAAAGTGGCTGAAAGTGAAAATAACATCA
GGAGCAGATCTTGGTGCCGTGAAGACCTGTGAGATGTGTAAGCAAGGCCTGCTGGTTGACCTGGGTGACT
TTAACATGATTGAGTTCTACCAGAAGCACCAGCAATCTCAGGCACAAAACGAGCTGATGAATTCAGGCTT
GTACCTGGTGCTGCTGCTTCACCTCTATGAGCAGAGGTTTGCAGAACTCATGAGGCTCAACCACAACCAG
GTGGAAAGAGAGAGGTTGTCAAGAAATTACCCACAACCCAGAACAGAGGAAAATGAAAGTAGGTTTTGGG
GGCCAGTCCTGCCATTTTGA

Translation (799 aa):
MLHDARDRQKFFSDVQYLRDMQHKVDSEYQACLRRQEYRRDPNEKKRDQFWGQETSFERSRFSSRSSSKQ
SSSEEDALTEPRSSIKISAFKCDSKLPAIDQTSVKQKHKSTMTVRKAEKVDPSEPSPDQAPMVLLRKRKP
NLRRFTVSPESHSPRASGDRSRQKQQWPAKVPVPRGADQVVQQEGLMCNTKLKRPNQERRNLVPSSQPMT
ENAPDRAKKGDPSAPSQSELHPALSQAFQGKNSPQVLSEFSGPPLTPTTVGGPRKASFRFRDEDFYSILS
LNSRRESDDTEEETQSEECLWVGVRSPCSPSHHKRSRFGGTSTPQAKNKNFEENAENCRGHSSRRSEPSH
GSLRISNAMEPATERPSAGQRLSQDPGLPDRESATEKDRGGSENAKKSPLSWDTKSEPRQEVGVNAENVW
SDCISVEHRPGTHDSEGYWKDYLNSSQNSLDYFISGRPISPRSSVNSSYNPPASFMHSALRDDIPVDLSM
SSTSVHSSDSEGNSGFHVCQPLSPIRNRTPFASAENHNYFPVNSAHEFAVREAEDTTLTSQPQGAPLYTD
LLLNPQGNLSLVDSSSSSPSRMNSEGHLHVSGSLQENTPFTFFAVSHFPNQNDNGSRMAASGFTDEKETS
KIKADPEKLKKLQESLLEEDSEEEGDLCRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITS
GADLGAVKTCEMCKQGLLVDLGDFNMIEFYQKHQQSQAQNELMNSGLYLVLLLHLYEQRFAELMRLNHNQ
VERERLSRNYPQPRTEENESRFWGPVLPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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