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Report for CCDS2128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2128.1 Public Homo sapiens 2 TMEM177 24 110 108 CCDS HistoryNCBI Gene:80775Re-query CCDS DB by CCDS ID:2128.1Re-query CCDS DB by GeneID:80775See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272521.7 ENSP00000272521.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272521.7Link to Ensembl Protein Viewer:ENSP00000272521.6Re-query CCDS DB by Nucleotide ID:ENST00000272521Re-query CCDS DB by Protein ID:ENSP00000272521
Original member Current member EBI ENST00000401466.5 ENSP00000385966.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401466.5Link to Ensembl Protein Viewer:ENSP00000385966.1Re-query CCDS DB by Nucleotide ID:ENST00000401466Re-query CCDS DB by Protein ID:ENSP00000385966
Original member Current member EBI ENST00000424086.5 ENSP00000402661.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424086.5Link to Ensembl Protein Viewer:ENSP00000402661.1Re-query CCDS DB by Nucleotide ID:ENST00000424086Re-query CCDS DB by Protein ID:ENSP00000402661
Original member Current member NCBI NM_001105198.2 NP_001098668.1 Accepted alive Link to Nucleotide Sequence:NM_001105198.2Link to Protein Sequence:NP_001098668.1Re-query CCDS DB by Nucleotide ID:NM_001105198Re-query CCDS DB by Protein ID:NP_001098668Link to BLAST:NP_001098668.1
Original member Current member NCBI NM_001105199.2 NP_001098669.1 Accepted alive Link to Nucleotide Sequence:NM_001105199.2Link to Protein Sequence:NP_001098669.1Re-query CCDS DB by Nucleotide ID:NM_001105199Re-query CCDS DB by Protein ID:NP_001098669Link to BLAST:NP_001098669.1
Original member Current member NCBI NM_030577.3 NP_085054.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030577.3Link to Protein Sequence:NP_085054.2Re-query CCDS DB by Nucleotide ID:NM_030577Re-query CCDS DB by Protein ID:NP_085054Link to BLAST:NP_085054.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001098668.1 311 Q53S58 311 100% 0 0
NP_001098669.1 311 Q53S58 311 100% 0 0
NP_085054.2 311 Q53S58 311 100% 0 0

Chromosomal Locations for CCDS 2128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119680854 119681789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACACAGGACAGGCCTCTTGGTGGGTTCCT
GTGCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCTTCCCGGATCCCGTGGTCCAATGGCTCTACCA
GTACTGGCCTCAGGGCCAGCCAGCTCCGCTCCCTCCACAGCTGCAGAGCCTCTTCCAAGAGGTGCTACAG
GACATAGGTGTTCCTTCAGGCCATTGCTACAAGCCCTTCACCACCTTCACCTTCCAACCTGTGAGTGCAG
GCTTCCCAAGACTCCCTGCTGGGGCTGTGGTGGGCATCCCTGCCAGTTTCTTGGGAGACCTAGTGATCAA
CACTAACCATCCCGTGGTCATACATGGGCATACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGA
GCTTCCCTGACCTTGTCCCGTGAAGCCCAGAAGTTCGCCTTGGCCAGGGAAGTGGTGTACCTGGAAAGCA
GTACCACTGCCGTGCACGCCCTGCTGGCCCCAGCTTGCCTGGCAGGGACCTGGGCACTGGGCGTGGGTGC
CAAGTACACCCTGGGGCTCCATGCAGGCCCCATGAATTTACGGGCTGCCTTCAGCTTGGTGGCAGCAGTG
GCAGGCTTTGTGGCCTACGCCTTCTCCCAGGATTCTCTCACTCATGCCGTGGAGTCCTGGCTGGACCGCC
GCACGGCCTCCCTCTCTGCAGCCTATGCCTGTGGTGGAGTGGAGTTCTATGAGAAGCTTCTGTCGGGCAA
CCTGGCCCTGCGCAGTCTCTTGGGCAAAGACGGGGAGAAGCTGTATACACCCAGCGGGAACATCGTCCCC
AGACACTTGTTCCGAATCAAACATTTACCCTACACCACCCGCCGGGACTCTGTGCTGCAGATGTGGAGGG
GGATGCTCAATCCGGGCCGCTCCTGA

Translation (311 aa):
MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQLQSLFQEVLQ
DIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARLR
ASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGTWALGVGAKYTLGLHAGPMNLRAAFSLVAAV
AGFVAYAFSQDSLTHAVESWLDRRTASLSAAYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVP
RHLFRIKHLPYTTRRDSVLQMWRGMLNPGRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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