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Report for CCDS12382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12382.1 Public Homo sapiens 19 UBA52 24 110 108 CCDS HistoryNCBI Gene:7311Re-query CCDS DB by CCDS ID:12382.1Re-query CCDS DB by GeneID:7311See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12382.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000442744.7 ENSP00000388107.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000442744.7Link to Ensembl Protein Viewer:ENSP00000388107.1Re-query CCDS DB by Nucleotide ID:ENST00000442744Re-query CCDS DB by Protein ID:ENSP00000388107
Original member Current member EBI ENST00000430157.6 ENSP00000396910.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430157.6Link to Ensembl Protein Viewer:ENSP00000396910.1Re-query CCDS DB by Nucleotide ID:ENST00000430157Re-query CCDS DB by Protein ID:ENSP00000396910
Original member Current member EBI ENST00000595683.5 ENSP00000470419.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595683.5Link to Ensembl Protein Viewer:ENSP00000470419.1Re-query CCDS DB by Nucleotide ID:ENST00000595683Re-query CCDS DB by Protein ID:ENSP00000470419
Original member Current member EBI ENST00000599551.5 ENSP00000470507.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599551.5Link to Ensembl Protein Viewer:ENSP00000470507.1Re-query CCDS DB by Nucleotide ID:ENST00000599551Re-query CCDS DB by Protein ID:ENSP00000470507
Original member Current member EBI ENST00000596273.5 ENSP00000471062.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000596273.5Link to Ensembl Protein Viewer:ENSP00000471062.1Re-query CCDS DB by Nucleotide ID:ENST00000596273Re-query CCDS DB by Protein ID:ENSP00000471062
Original member Current member EBI ENST00000599595.5 ENSP00000471464.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599595.5Link to Ensembl Protein Viewer:ENSP00000471464.1Re-query CCDS DB by Nucleotide ID:ENST00000599595Re-query CCDS DB by Protein ID:ENSP00000471464
Original member Current member EBI ENST00000595158.5 ENSP00000471622.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595158.5Link to Ensembl Protein Viewer:ENSP00000471622.1Re-query CCDS DB by Nucleotide ID:ENST00000595158Re-query CCDS DB by Protein ID:ENSP00000471622
Original member Current member EBI ENST00000596304.5 ENSP00000472264.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000596304.5Link to Ensembl Protein Viewer:ENSP00000472264.1Re-query CCDS DB by Nucleotide ID:ENST00000596304Re-query CCDS DB by Protein ID:ENSP00000472264
Original member Current member EBI ENST00000598780.5 ENSP00000472545.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598780.5Link to Ensembl Protein Viewer:ENSP00000472545.1Re-query CCDS DB by Nucleotide ID:ENST00000598780Re-query CCDS DB by Protein ID:ENSP00000472545
Original member Current member EBI ENST00000597451.5 ENSP00000473048.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000597451.5Link to Ensembl Protein Viewer:ENSP00000473048.1Re-query CCDS DB by Nucleotide ID:ENST00000597451Re-query CCDS DB by Protein ID:ENSP00000473048
Original member Current member NCBI NM_001033930.3 NP_001029102.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001033930.3Link to Protein Sequence:NP_001029102.1Re-query CCDS DB by Nucleotide ID:NM_001033930Re-query CCDS DB by Protein ID:NP_001029102Link to BLAST:NP_001029102.1
Original member Current member NCBI NM_001321017.2 NP_001307946.1 Accepted alive Link to Nucleotide Sequence:NM_001321017.2Link to Protein Sequence:NP_001307946.1Re-query CCDS DB by Nucleotide ID:NM_001321017Re-query CCDS DB by Protein ID:NP_001307946Link to BLAST:NP_001307946.1
Original member Current member NCBI NM_001321018.2 NP_001307947.1 Accepted alive Link to Nucleotide Sequence:NM_001321018.2Link to Protein Sequence:NP_001307947.1Re-query CCDS DB by Nucleotide ID:NM_001321018Re-query CCDS DB by Protein ID:NP_001307947Link to BLAST:NP_001307947.1
Original member Current member NCBI NM_001321019.2 NP_001307948.1 Accepted alive Link to Nucleotide Sequence:NM_001321019.2Link to Protein Sequence:NP_001307948.1Re-query CCDS DB by Nucleotide ID:NM_001321019Re-query CCDS DB by Protein ID:NP_001307948Link to BLAST:NP_001307948.1
Original member Current member NCBI NM_001321020.2 NP_001307949.1 Accepted alive Link to Nucleotide Sequence:NM_001321020.2Link to Protein Sequence:NP_001307949.1Re-query CCDS DB by Nucleotide ID:NM_001321020Re-query CCDS DB by Protein ID:NP_001307949Link to BLAST:NP_001307949.1
Original member Current member NCBI NM_003333.5 NP_003324.1 Accepted alive Link to Nucleotide Sequence:NM_003333.5Link to Protein Sequence:NP_003324.1Re-query CCDS DB by Nucleotide ID:NM_003333Re-query CCDS DB by Protein ID:NP_003324Link to BLAST:NP_003324.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001029102.1 128 P62987 128 100% 0 0
NP_001307946.1 128 P62987 128 100% 0 0
NP_001307947.1 128 P62987 128 100% 0 0
NP_001307948.1 128 P62987 128 100% 0 0
NP_001307949.1 128 P62987 128 100% 0 0
NP_003324.1 128 P62987 128 100% 0 0

Chromosomal Locations for CCDS 12382.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 18573301 18573403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18573662 18573748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18574870 18574972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18575057 18575150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTG
AGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGG
CAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCACCCTGCACCTGGTG
TTGCGCCTGCGAGGTGGCATTATTGAGCCTTCTCTCCGCCAGCTTGCCCAGAAATACAACTGCGACAAGA
TGATCTGCCGCAAGTGCTATGCTCGCCTTCACCCTCGTGCTGTCAACTGCCGCAAGAAGAAGTGTGGTCA
CACCAACAACCTGCGTCCCAAGAAGAAGGTCAAATAA

Translation (128 aa):
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
LRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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