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Report for CCDS5321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5321.1 Public Homo sapiens 7 GPR146 24 110 108 CCDS HistoryNCBI Gene:115330Re-query CCDS DB by CCDS ID:5321.1Re-query CCDS DB by GeneID:115330See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5321.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397095.2 ENSP00000380283.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397095.2Link to Ensembl Protein Viewer:ENSP00000380283.1Re-query CCDS DB by Nucleotide ID:ENST00000397095Re-query CCDS DB by Protein ID:ENSP00000380283
Original member Current member EBI ENST00000444847.2 ENSP00000410743.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000444847.2Link to Ensembl Protein Viewer:ENSP00000410743.2Re-query CCDS DB by Nucleotide ID:ENST00000444847Re-query CCDS DB by Protein ID:ENSP00000410743
Original member Current member NCBI NM_001303473.2 NP_001290402.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001303473.2Link to Protein Sequence:NP_001290402.1Re-query CCDS DB by Nucleotide ID:NM_001303473Re-query CCDS DB by Protein ID:NP_001290402Link to BLAST:NP_001290402.1
Original member Current member NCBI NM_001303474.2 NP_001290403.1 Accepted alive Link to Nucleotide Sequence:NM_001303474.2Link to Protein Sequence:NP_001290403.1Re-query CCDS DB by Nucleotide ID:NM_001303474Re-query CCDS DB by Protein ID:NP_001290403Link to BLAST:NP_001290403.1
Original member Current member NCBI NM_138445.4 NP_612454.1 Accepted alive Link to Nucleotide Sequence:NM_138445.4Link to Protein Sequence:NP_612454.1Re-query CCDS DB by Nucleotide ID:NM_138445Re-query CCDS DB by Protein ID:NP_612454Link to BLAST:NP_612454.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290402.1 333 Q96CH1 333 100% 0 0
NP_001290403.1 333 Q96CH1 333 100% 0 0
NP_612454.1 333 Q96CH1 333 100% 0 0

Chromosomal Locations for CCDS 5321.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 1057516 1058517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGTGGAGCTGCAGCTGGTTCAACGGCACAGGGCTGGTGGAGGAGCTGCCTGCCTGCCAGGACCTGCAGC
TGGGGCTGTCACTGTTGTCGCTGCTGGGCCTGGTGGTGGGCGTGCCAGTGGGCCTGTGCTACAACGCCCT
GCTGGTGCTGGCCAACCTACACAGCAAGGCCAGCATGACCATGCCGGACGTGTACTTTGTCAACATGGCA
GTGGCAGGCCTGGTGCTCAGCGCCCTGGCCCCTGTGCACCTGCTCGGCCCCCCGAGCTCCCGGTGGGCGC
TGTGGAGTGTGGGCGGCGAAGTCCACGTGGCACTGCAGATCCCCTTCAATGTGTCCTCACTGGTGGCCAT
GTACTCCACCGCCCTGCTGAGCCTCGACCACTACATCGAGCGTGCACTGCCGCGGACCTACATGGCCAGC
GTGTACAACACGCGGCACGTGTGCGGCTTCGTGTGGGGTGGCGCGCTGCTGACCAGCTTCTCCTCGCTGC
TCTTCTACATCTGCAGCCATGTGTCCACCCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAGAAGCTGC
CGACGCCACGCTGGTGTTCATCGGCTACGTGGTGCCAGCACTGGCCACCCTCTACGCGCTGGTGCTACTC
TCCCGCGTCCGCAGGGAGGACACGCCCCTGGACCGGGACACGGGCCGGCTGGAGCCCTCGGCACACAGGC
TGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGACGCCACACTATCTGATCCTGCTGGGGCACAC
GGTCATCATCTCGCGAGGGAAGCCCGTGGACGCACACTACCTGGGGCTACTGCACTTTGTGAAGGATTTC
TCCAAACTCCTGGCCTTCTCCAGCAGCTTTGTGACACCACTTCTCTACCGCTACATGAACCAGAGCTTCC
CCAGCAAGCTCCAACGGCTGATGAAAAAGCTGCCCTGCGGGGACCGGCACTGCTCCCCGGACCACATGGG
GGTGCAGCAGGTGCTGGCGTAG

Translation (333 aa):
MWSCSWFNGTGLVEELPACQDLQLGLSLLSLLGLVVGVPVGLCYNALLVLANLHSKASMTMPDVYFVNMA
VAGLVLSALAPVHLLGPPSSRWALWSVGGEVHVALQIPFNVSSLVAMYSTALLSLDHYIERALPRTYMAS
VYNTRHVCGFVWGGALLTSFSSLLFYICSHVSTRALECAKMQNAEAADATLVFIGYVVPALATLYALVLL
SRVRREDTPLDRDTGRLEPSAHRLLVATVCTQFGLWTPHYLILLGHTVIISRGKPVDAHYLGLLHFVKDF
SKLLAFSSSFVTPLLYRYMNQSFPSKLQRLMKKLPCGDRHCSPDHMGVQQVLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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