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Report for CCDS64595.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64595.1 Public Homo sapiens 7 ICA1 24 110 108 CCDS HistoryNCBI Gene:3382Re-query CCDS DB by CCDS ID:64595.1Re-query CCDS DB by GeneID:3382See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 64595.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265577.11 ENSP00000265577.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000265577.11Link to Ensembl Protein Viewer:ENSP00000265577.7Re-query CCDS DB by Nucleotide ID:ENST00000265577Re-query CCDS DB by Protein ID:ENSP00000265577
Original member Current member NCBI NM_001276478.2 NP_001263407.1 Accepted alive Link to Nucleotide Sequence:NM_001276478.2Link to Protein Sequence:NP_001263407.1Re-query CCDS DB by Nucleotide ID:NM_001276478Re-query CCDS DB by Protein ID:NP_001263407Link to BLAST:NP_001263407.1
Original member Current member NCBI NM_001350821.2 NP_001337750.1 Accepted alive Link to Nucleotide Sequence:NM_001350821.2Link to Protein Sequence:NP_001337750.1Re-query CCDS DB by Nucleotide ID:NM_001350821Re-query CCDS DB by Protein ID:NP_001337750Link to BLAST:NP_001337750.1
Original member Current member NCBI NM_001350823.2 NP_001337752.1 Accepted alive Link to Nucleotide Sequence:NM_001350823.2Link to Protein Sequence:NP_001337752.1Re-query CCDS DB by Nucleotide ID:NM_001350823Re-query CCDS DB by Protein ID:NP_001337752Link to BLAST:NP_001337752.1
Original member Current member NCBI NM_001350824.2 NP_001337753.1 Accepted alive Link to Nucleotide Sequence:NM_001350824.2Link to Protein Sequence:NP_001337753.1Re-query CCDS DB by Nucleotide ID:NM_001350824Re-query CCDS DB by Protein ID:NP_001337753Link to BLAST:NP_001337753.1
Original member Current member NCBI NM_001350825.2 NP_001337754.1 Accepted alive Link to Nucleotide Sequence:NM_001350825.2Link to Protein Sequence:NP_001337754.1Re-query CCDS DB by Nucleotide ID:NM_001350825Re-query CCDS DB by Protein ID:NP_001337754Link to BLAST:NP_001337754.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263407.1 482 Q05084-3 482 100% 0 0
NP_001337750.1 482 Q05084-3 482 100% 0 0
NP_001337752.1 482 Q05084-3 482 100% 0 0
NP_001337753.1 482 Q05084-3 482 100% 0 0
NP_001337754.1 482 Q05084-3 482 100% 0 0

Chromosomal Locations for CCDS 64595.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 8113923 8114044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8127873 8128142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8138840 8138881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8138985 8139047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8141765 8141817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8143875 8143972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8157116 8157214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8158527 8158652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8218305 8218503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8221275 8221398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8228601 8228673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8232590 8232752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 8235910 8235926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1449 nt):
ATGTCAGGACACAAATGTTATCCCTGGGACTTACAGGATCGATATGCTCAAGATAAGTCAGTTGTAAATA
AGATGCAACAGAAATATTGGGAGACGAAGCAGGCCTTTATTAAAGCCACAGGGAAGAAGGAAGATGAACA
TGTTGTTGCCTCTGACGCGGACCTGGATGCCAAGCTAGAGCTGTTTCATTCAATTCAGAGAACCTGTCTG
GACTTATCGAAAGCAATTGTACTCTATCAAAAGAGGATATGTTTCTTGTCTCAAGAAGAAAACGAACTGG
GAAAATTTCTTCGATCCCAAGGTTTCCAAGATAAAACCAGAGCAGGAAAGATGATGCAAGCGACAGGAAA
GGCCCTCTGCTTTTCTTCCCAGCAAAGGTTGGCCTTACGAAATCCTTTGTGTCGATTTCACCAAGAAGTG
GAGACTTTTCGGCATCGGGCCATCTCAGATACTTGGCTGACGGTGAACCGCATGGAACAGTGCAGGACGG
AATATAGAGGAGCACTATTATGGATGAAGGACGTGTCTCAGGAGCTTGATCCAGACCTCTACAAGCAAAT
GGAGAAGTTCAGGAAGGTACAAACACAAGTGCGCCTTGCAAAAAAAAACTTTGACAAATTGAAGATGGAT
GTTTGTCAAAAAGTGGATCTTCTTGGAGCGAGCAGATGCAATCTCTTGTCTCACATGCTAGCAACATACC
AGACCACTCTGCTTCATTTTTGGGAGAAAACTTCTCACACTATGGCAGCCATCCATGAGAGTTTCAAAGG
TTATCAACCATATGAATTTACTACTTTAAAGAGCTTACAAGACCCTATGAAAAAATTAGTTGAGAAAGAA
GAGAAGAAGAAAATCAACCAGCAGGAAAGTACAGATGCAGCCGTGCAGGAGCCGAGCCAATTAATTTCAT
TAGAGGAAGAAAACCAGCGCAAGGAATCCTCTAGTTTTAAGACTGAAGATGGAAAAAGTATTTTATCTGC
CTTAGACAAAGGCTCTACACATACTGCATGCTCAGGACCCATAGATGAACTATTAGACATGAAATCTGAG
GAAGGTGCTTGCCTGGGACCAGTGGCAGGGACCCCGGAACCTGAAGGTGCTGACAAAGATGACCTGCTGC
TGTTGAGTGAGATCTTCAATGCTTCCTCCTTGGAAGAGGGCGAGTTCAGCAAAGAGTGGGCCGCTGTGTT
TGGAGACGGCCAAGTGAAGGAGCCAGTGCCCACTATGGCCCTGGGAGAGCCAGACCCCAAGGCCCAGACA
GGCTCAGGTTTCCTTCCTTCGCAGCTTTTAGACCAAAATATGAAAGACTTACAGGCCTCGCTACAAGAAC
CTGCTAAGGCTGCCTCAGACCTGACTGCCTGGTTCAGCCTCTTCGCTGACCTCGACCCACTCTCAAATCC
TGATGCTGTTGGGAAAACCGATAAAGAACACGAATTGCTCAATGCATGA

Translation (482 aa):
MSGHKCYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCL
DLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEV
ETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKNFDKLKMD
VCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSLQDPMKKLVEKE
EKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDGKSILSALDKGSTHTACSGPIDELLDMKSE
EGACLGPVAGTPEPEGADKDDLLLLSEIFNASSLEEGEFSKEWAAVFGDGQVKEPVPTMALGEPDPKAQT
GSGFLPSQLLDQNMKDLQASLQEPAKAASDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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