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Report for CCDS13585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13585.1 Public Homo sapiens 21 BACH1 24 110 108 CCDS HistoryNCBI Gene:571Re-query CCDS DB by CCDS ID:13585.1Re-query CCDS DB by GeneID:571See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13585.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286800.8 ENSP00000286800.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286800.8Link to Ensembl Protein Viewer:ENSP00000286800.3Re-query CCDS DB by Nucleotide ID:ENST00000286800Re-query CCDS DB by Protein ID:ENSP00000286800
Original member Current member EBI ENST00000399921.5 ENSP00000382805.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399921.5Link to Ensembl Protein Viewer:ENSP00000382805.1Re-query CCDS DB by Nucleotide ID:ENST00000399921Re-query CCDS DB by Protein ID:ENSP00000382805
Original member Current member NCBI NM_001186.4 NP_001177.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001186.4Link to Protein Sequence:NP_001177.1Re-query CCDS DB by Nucleotide ID:NM_001186Re-query CCDS DB by Protein ID:NP_001177Link to BLAST:NP_001177.1
Original member Current member NCBI NM_206866.3 NP_996749.1 Accepted alive Link to Nucleotide Sequence:NM_206866.3Link to Protein Sequence:NP_996749.1Re-query CCDS DB by Nucleotide ID:NM_206866Re-query CCDS DB by Protein ID:NP_996749Link to BLAST:NP_996749.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177.1 736 O14867 736 100% 0 0
NP_996749.1 736 O14867 736 100% 0 0

Chromosomal Locations for CCDS 13585.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 29321281 29321514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29326059 29327393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29329487 29329693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29342399 29342833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2211 nt):
ATGTCTCTGAGTGAGAACTCGGTTTTTGCCTATGAATCTTCTGTGCATAGCACCAATGTTTTACTCAGCC
TTAATGACCAGCGGAAGAAAGATGTGCTGTGCGATGTCACCATCTTTGTGGAGGGACAGCGGTTCCGCGC
TCACCGGTCCGTGCTGGCGGCATGCAGCAGTTACTTCCACTCAAGAATCGTAGGCCAGGCTGATGGAGAG
CTGAACATTACTCTTCCAGAAGAGGTGACAGTTAAAGGATTTGAACCTTTAATTCAGTTTGCCTACACTG
CTAAACTGATTTTAAGTAAAGAGAATGTGGATGAAGTGTGCAAATGTGTGGAGTTTTTAAGTGTACATAA
TATTGAGGAATCCTGCTTTCAGTTTCTGAAATTTAAGTTTTTGGACTCCACTGCAGACCAGCAAGAATGC
CCAAGAAAAAAATGCTTTTCATCACACTGTCAGAAAACAGACCTTAAACTTTCACTTTTGGACCAGAGGG
ATCTAGAAACTGATGAAGTGGAGGAATTTCTGGAAAATAAAAATGTTCAGACTCCTCAGTGTAAACTCCG
CAGGTATCAAGGAAATGCAAAAGCCTCACCTCCTCTACAAGACAGTGCCAGTCAGACATATGAGTCCATG
TGCTTAGAGAAGGATGCTGCTCTGGCCTTGCCTTCTTTATGCCCCAAATACAGAAAATTCCAAAAAGCAT
TTGGAACTGACAGAGTCCGTACTGGGGAATCTAGTGTCAAAGACATTCATGCTTCTGTTCAGCCAAATGA
AAGGTCTGAAAATGAATGCCTGGGAGGAGTCCCGGAGTGTAGAGATTTGCAGGTGATGTTAAAATGTGAC
GAAAGTAAATTAGCAATGGAACCTGAAGAAACGAAGAAAGATCCTGCTTCTCAGTGCCCAACTGAAAAAT
CAGAAGTGACTCCTTTCCCCCACAATTCTTCCATAGACCCTCATGGACTTTATTCTTTGTCTCTTTTACA
CACATATGACCAATATGGTGACTTGAATTTTGCTGGTATGCAAAACACAACAGTGTTAACAGAAAAGCCT
TTGTCAGGTACAGACGTCCAAGAAAAAACATTTGGTGAAAGTCAGGATTTACCTTTGAAATCCGACTTGG
GCACCAGGGAAGATAGTAGTGTTGCATCTAGTGATAGGAGTAGTGTGGAGCGAGAAGTGGCAGAACACCT
AGCAAAAGGCTTCTGGAGTGACATTTGCAGCACGGACACTCCTTGCCAAATGCAGTTATCACCTGCTGTG
GCCAAAGATGGCTCAGAACAGATCTCACAGAAACGGTCTGAGTGTCCGTGGTTAGGTATCAGGATTAGTG
AGAGCCCAGAACCAGGTCAAAGGACTTTCACAACATTAAGTTCTGTCAACTGCCCTTTTATAAGTACTCT
GAGTACTGAAGGCTGTTCAAGCAATTTGGAAATTGGAAACGATGATTATGTTTCAGAACCCCAGCAAGAA
CCTTGCCCATATGCTTGTGTCATTAGCTTGGGAGACGACTCTGAGACGGACACCGAAGGAGACAGTGAAT
CCTGTTCAGCCAGAGAACAAGAATGTGAGGTAAAACTGCCATTCAATGCACAACGGATAATTTCACTGTC
TCGAAATGATTTTCAGTCCTTGTTGAAAATGCACAAGCTTACTCCAGAACAGCTGGATTGTATCCATGAT
ATTCGAAGAAGAAGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTGTATACAGA
ATCTTGAATCAGAAATTGAGAAGCTGCAAAGTGAAAAGGAGAGCTTGTTGAAGGAAAGAGATCACATTTT
GTCAACTCTGGGTGAGACAAAGCAGAACCTAACTGGACTTTGCCAGAAAGTTTGTAAAGAAGCAGCTCTG
AGTCAAGAACAAATACAGATACTCGCCAAGTACTCAGCTGCAGATTGCCCACTTTCATTTTTAATTTCTG
AAAAAGATAAAAGTACTCCTGATGGTGAACTGGCGTTACCATCAATTTTCAGTTTATCTGACCGGCCTCC
AGCAGTGCTGCCTCCCTGTGCCAGAGGAAACAGTGAGCCTGGCTACGCGCGAGGGCAGGAGTCCCAGCAG
ATGTCCACAGCCACCTCTGAGCAAGCTGGGCCTGCGGAACAGTGTCGTCAGAGTGGTGGGATCTCAGATT
TCTGTCAGCAGATGACTGATAAATGTACTACTGATGAGTAA

Translation (736 aa):
MSLSENSVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE
LNITLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLKFKFLDSTADQQEC
PRKKCFSSHCQKTDLKLSLLDQRDLETDEVEEFLENKNVQTPQCKLRRYQGNAKASPPLQDSASQTYESM
CLEKDAALALPSLCPKYRKFQKAFGTDRVRTGESSVKDIHASVQPNERSENECLGGVPECRDLQVMLKCD
ESKLAMEPEETKKDPASQCPTEKSEVTPFPHNSSIDPHGLYSLSLLHTYDQYGDLNFAGMQNTTVLTEKP
LSGTDVQEKTFGESQDLPLKSDLGTREDSSVASSDRSSVEREVAEHLAKGFWSDICSTDTPCQMQLSPAV
AKDGSEQISQKRSECPWLGIRISESPEPGQRTFTTLSSVNCPFISTLSTEGCSSNLEIGNDDYVSEPQQE
PCPYACVISLGDDSETDTEGDSESCSAREQECEVKLPFNAQRIISLSRNDFQSLLKMHKLTPEQLDCIHD
IRRRSKNRIAAQRCRKRKLDCIQNLESEIEKLQSEKESLLKERDHILSTLGETKQNLTGLCQKVCKEAAL
SQEQIQILAKYSAADCPLSFLISEKDKSTPDGELALPSIFSLSDRPPAVLPPCARGNSEPGYARGQESQQ
MSTATSEQAGPAEQCRQSGGISDFCQQMTDKCTTDE


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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