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Report for CCDS58417.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58417.1 Public Homo sapiens 16 CORO7 24 110 108 CCDS HistoryNCBI Gene:79585Re-query CCDS DB by CCDS ID:58417.1Re-query CCDS DB by GeneID:79585See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58417.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537233.6 ENSP00000440460.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537233.6Link to Ensembl Protein Viewer:ENSP00000440460.2Re-query CCDS DB by Nucleotide ID:ENST00000537233Re-query CCDS DB by Protein ID:ENSP00000440460
Original member Current member NCBI NM_001201472.2 NP_001188401.1 Accepted alive Link to Nucleotide Sequence:NM_001201472.2Link to Protein Sequence:NP_001188401.1Re-query CCDS DB by Nucleotide ID:NM_001201472Re-query CCDS DB by Protein ID:NP_001188401Link to BLAST:NP_001188401.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001188401.1 907 P57737-4 907 100% 0 0

Chromosomal Locations for CCDS 58417.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4355158 4355163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4355286 4355372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4357168 4357259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4357968 4358103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4358367 4358483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4359296 4359385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4359480 4359621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4360278 4360363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4360444 4360548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4360943 4361085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4361162 4361248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4361361 4361469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4361985 4362160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4362612 4362738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4364276 4364413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4364597 4364689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4364775 4364920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4365003 4365060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4365491 4365545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4387986 4388068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4388545 4388631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4395289 4395339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4405491 4405567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4407501 4407684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4408181 4408197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4412356 4412430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4413308 4413404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4416459 4416518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2724 nt):
ATGAACCGCTTCAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCCGCCCCGCCGCGAGTCCTGGATCA
GTGACATTCGAGCAGGAACCGCCCCTTCATGCAGGAACCACATCAAATCAAGCTGCAGCTTGATCGCCTT
CAACTCCGACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTG
GCCCACCTGGGCTGCCATTCAGGCTCGGCTGACAGGACGGTAAAACTCTGGCGACTGCCAGGGCCTGGCC
AGGCCCTGCCCTCAGCACCCGGGGTGGTGCTGGGCCCCGAGGACCTCCCAGTGGAGGTACTGCAGTTCCA
CCCCACCTCTGACGGCATTCTGGTGAGCGCAGCAGGCACCACTGTGAAGGTCTGGGACGCAGCCAAGCAG
CAGCCCCTGACAGAGCTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAGATGGAGCCC
TGGTGGGCACGGCGTGCAAGGACAAGCAGCTGCGGATCTTTGACCCCAGAACAAAGCCGCGGGCCTCTCA
GAGCACGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGGGAGCACCTTGTG
TCTACTGGATTCAACCAGATGCGTGAGCGCGAAGTGAAGCTGTGGGACACGCGGTTCTTCTCCAGCGCCC
TGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTCTGGGCTCCT
GGTCCTGGCAGGAAAGGGCGAGAGGCAGCTGTACTGTTACGAGGTGGTCCCGCAGCAGCCGGCGCTGAGC
CCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCTTGTGCCCCGGCAGGCGCTGGCCG
TCATGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGGCTACCATGT
GCCCCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCTGCCACCGAC
CCCCATAGCTGGTGGGCTGGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCTGCCGGCCCC
ACCCGAGCTTCACTTCCTGTCTGGTGCCCCCTGCGGAGCCCCTCCCTGACACAGCCCAGCCTGCGGTGAT
GGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCTCTTCCCCTCCCAGTTCGCTGACCTCGCCC
TCCACGCCCTCCAGCCTGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCAGTTTGAGGT
CGCTGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCCATGCTCAGGGCACTGTCCTGCACCGAGACAG
CCACATCACCAACCTCAAGGGGCTCAACCTCACCACACCTGGTGAGAGTGACGGCTTCTGTGCCAACAAG
CTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGTGGCTGTGCTTGAGCTACGGAAGCCTGGCC
GCCTGCCCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCTGGGACCCCTT
TGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCCGCAGAGGGC
CTGGAAGAGGTGCTCACCACGCCAGAGACTGTGCTCACAGGCCACACGGAGAAGATCTGCTCCCTGCGCT
TCCACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACTGTTCGCATCTGGGACCTTCA
GGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGGAGTCCTGAT
GGGCAGCAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTGGCCCTGAGC
CCCTGCAGGAAGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGATGGTCGCTG
TCTGCTGGTGTCTGGCTTTGACAGCCAAAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAGGCCCTGGCC
GGCGGACCCTTGGCAGTGTTGGGCCTGGACGTGGCTCCCTCAACCCTGCTGCCCAGCTACGACCCAGACA
CTGGCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTGTATTCCTGTACGAGCTGCTCCCCGAGTCCCC
TTTCTTCCTGGAGTGCAACAGCTTCACGTCGCCTGACCCCCACAAGGGCCTCGTCCTCCTGCCTAAGACG
GAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGGAGCCTGTGG
CCTTCCGGCTGCCCCGAGTCCGGAAAGAGTTCTTCCAGGATGACGTGTTCCCAGACACGGCTGTGATCTG
GGAGCCTGTGCTCAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTCAGCCTGCAG
CCTCCTGACATGAGCCCAGTGAGCCAAGCCCCCCGAGAGGCCCCTGCTCGTCGGGCCCCATCCTCAGCGC
AGTACCTGGAAGAAAAGTCTGACCAGCAAAAGAAGGAGGAGCTGCTGAATGCCATGGTGGCAAAACTGGG
GAACCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTGGGACTAG

Translation (907 aa):
MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPLQGQGEDKRRV
AHLGCHSGSADRTVKLWRLPGPGQALPSAPGVVLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQ
QPLTELAAHGDLVQSAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLV
STGFNQMREREVKLWDTRFFSSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALS
PVTQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVPATD
PHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVGDADASEGFSSPPSSLTSP
STPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSHITNLKGLNLTTPGESDGFCANK
LRVAVPLLSSGGQVAVLELRKPGRLPDTALPTLQNGAAVTDLAWDPFDPHRLAVAGEDARIRLWRVPAEG
LEEVLTTPETVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSPD
GQQLATVCKDGRVRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVSGFDSQSERQLLLYEAEALA
GGPLAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPESPFFLECNSFTSPDPHKGLVLLPKT
ECDVREVELMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLLSLQ
PPDMSPVSQAPREAPARRAPSSAQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFEGVDEDEWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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