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Report for CCDS73917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73917.1 Public Homo sapiens 16 ATMIN 24 110 108 CCDS HistoryNCBI Gene:23300Re-query CCDS DB by CCDS ID:73917.1Re-query CCDS DB by GeneID:23300See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73917.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000566488.1 ENSP00000455497.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566488.1Link to Ensembl Protein Viewer:ENSP00000455497.1Re-query CCDS DB by Nucleotide ID:ENST00000566488Re-query CCDS DB by Protein ID:ENSP00000455497
Original member Current member EBI ENST00000564241.5 ENSP00000463478.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000564241.5Link to Ensembl Protein Viewer:ENSP00000463478.1Re-query CCDS DB by Nucleotide ID:ENST00000564241Re-query CCDS DB by Protein ID:ENSP00000463478
Original member Current member NCBI NM_001300728.2 NP_001287657.1 Accepted alive Link to Nucleotide Sequence:NM_001300728.2Link to Protein Sequence:NP_001287657.1Re-query CCDS DB by Nucleotide ID:NM_001300728Re-query CCDS DB by Protein ID:NP_001287657Link to BLAST:NP_001287657.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287657.1 667 O43313-2 667 100% 0 0

Chromosomal Locations for CCDS 73917.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 81042287 81042480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81043161 81044970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGAAAATGCATGCTGAGAAGAAGCACAAATGTAGTAAGTGCAGCAATTCGTACGGTACAGAATGGGACC
TGAAAAGACATGCAGAGGACTGTGGCAAGACCTTCCGGTGCACATGCGGCTGTCCCTACGCCAGTAGAAC
AGCACTGCAGTCTCACATCTACCGAACTGGGCACGAGATACCTGCAGAACACAGGGACCCACCTAGTAAG
AAAAGGAAAATGGAAAACTGTGCACAAAACCAGAAGTTATCCAACAAGACCATTGAATCATTGAACAACC
AACCAATCCCTAGACCAGACACTCAAGAACTAGAAGCTTCAGAAATAAAGCTAGAACCATCTTTTGAAGA
CTCTTGTGGCTCTAACACTGACAAGCAGACTCTTACAACACCACCGAGATATCCTCAGAAGTTGCTTTTA
CCAAAGCCCAAAGTGGCTTTGGTTAAACTACCCGTGATGCAGTTTTCTGTCATGCCTGTCTTTGTGCCTA
CAGCCGACTCCTCAGCCCAGCCTGTGGTGTTAGGTGTTGATCAGGGCTCTGCCACAGGGGCTGTGCACTT
AATGCCCTTGTCAGTAGGAACCCTGATCCTCGGCCTAGATTCAGAGGCTTGCTCTCTTAAGGAGAGCCTA
CCTCTTTTCAAAATTGCTAATCCTATTGCTGGTGAGCCAATAAGTACTGGTGTTCAAGTGAACTTTGGTA
AAAGTCCATCTAATCCTTTACAAGAACTAGGGAACACGTGTCAAAAGAATAGCATTTCTTCAATCAACGT
GCAGACAGATCTGTCTTATGCCTCACAAAACTTTATACCTTCTGCACAGTGGGCCACTGCTGATTCCTCT
GTGTCGTCTTGTTCTCAAACTGATTTGTCGTTTGATTCTCAAGTGTCTCTTCCCATTAGTGTTCACACTC
AGACATTTTTGCCCAGCTCTAAGGTAACTTCATCTATAGCTGCTCAGACTGATGCATTTATGGACACCTG
TTTCCAGTCAGGTGGGGTCTCCAGAGAAACTCAAACCAGTGGGATAGAAAGTCCAACGGATGACCATGTA
CAGATGGACCAAGCTGGAATGTGCGGAGACATTTTTGAGAGTGTTCATTCATCATATAATGTTGCTACAG
GTAACATTATAAGCAACAGTTTAGTAGCAGAGACAGTAACTCATAGTTTGTTACCTCAGAATGAGCCTAA
GACTTTAAATCAAGATATTGAGAAATCTGCACCAATTATAAATTTCAGTGCACAGAATAGTATGCTTCCT
TCACAGAACATGACAGATAATCAGACCCAAACCATAGATTTATTAAGTGATTTGGAAAACATCTTGTCAA
GTAATCTGCCTGCTCAGACATTGGATCATCGTAGTCTTTTGTCTGACACAAATCCTGGACCTGACACCCA
GCTCCCATCTGGCCCAGCCCAGAACCCCGGAATCGATTTTGATATCGAAGAGTTCTTTTCGGCCTCAAAT
ATCCAGACTCAAACTGAAGAGAGTGAACTTAGCACCATGACCACCGAGCCAGTCTTGGAGTCACTGGACA
TAGAGACTCAAACGGACTTCTTACTCGCAGATACCTCTGCTCAGTCCTATGGGTGTAGGGGAAATTCTAA
CTTCTTAGGCCTTGAGATGTTTGACACACAGACACAGACAGACTTAAACTTTTTCTTAGACAGTAGCCCT
CATCTGCCTCTGGGAAGTATTCTGAAACACTCCAGCTTTTCCGTGAGTACTGATTCATCTGACACAGAGA
CCCAAACTGAAGGAGTCTCCACTGCTAAAAATATACCTGCTCTAGAAAGCAAAGTTCAGTTGAACAGTAC
AGAAACACAGACCATGAGTTCTGGGTTTGAAACCCTGGGGAGCTTGTTCTTCACCAGCAACGAAACTCAG
ACAGCAATGGATGACTTTCTTCTGGCTGATCTGGCCTGGAACACGATGGAGTCTCAGTTCAGCTCTGTAG
AAACCCAGACTTCTGCGGAACCACACACAGTCTCCAACTTCTAA

Translation (667 aa):
MKMHAEKKHKCSKCSNSYGTEWDLKRHAEDCGKTFRCTCGCPYASRTALQSHIYRTGHEIPAEHRDPPSK
KRKMENCAQNQKLSNKTIESLNNQPIPRPDTQELEASEIKLEPSFEDSCGSNTDKQTLTTPPRYPQKLLL
PKPKVALVKLPVMQFSVMPVFVPTADSSAQPVVLGVDQGSATGAVHLMPLSVGTLILGLDSEACSLKESL
PLFKIANPIAGEPISTGVQVNFGKSPSNPLQELGNTCQKNSISSINVQTDLSYASQNFIPSAQWATADSS
VSSCSQTDLSFDSQVSLPISVHTQTFLPSSKVTSSIAAQTDAFMDTCFQSGGVSRETQTSGIESPTDDHV
QMDQAGMCGDIFESVHSSYNVATGNIISNSLVAETVTHSLLPQNEPKTLNQDIEKSAPIINFSAQNSMLP
SQNMTDNQTQTIDLLSDLENILSSNLPAQTLDHRSLLSDTNPGPDTQLPSGPAQNPGIDFDIEEFFSASN
IQTQTEESELSTMTTEPVLESLDIETQTDFLLADTSAQSYGCRGNSNFLGLEMFDTQTQTDLNFFLDSSP
HLPLGSILKHSSFSVSTDSSDTETQTEGVSTAKNIPALESKVQLNSTETQTMSSGFETLGSLFFTSNETQ
TAMDDFLLADLAWNTMESQFSSVETQTSAEPHTVSNF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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