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Report for CCDS59114.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59114.1 Public Homo sapiens 8 LY6K 24 110 108 CCDS HistoryNCBI Gene:54742Re-query CCDS DB by CCDS ID:59114.1Re-query CCDS DB by GeneID:54742See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 59114.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000519387.1 ENSP00000429695.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519387.1Link to Ensembl Protein Viewer:ENSP00000429695.1Re-query CCDS DB by Nucleotide ID:ENST00000519387Re-query CCDS DB by Protein ID:ENSP00000429695
Original member Current member NCBI NM_001160355.2 NP_001153827.1 Accepted alive Link to Nucleotide Sequence:NM_001160355.2Link to Protein Sequence:NP_001153827.1Re-query CCDS DB by Nucleotide ID:NM_001160355Re-query CCDS DB by Protein ID:NP_001153827Link to BLAST:NP_001153827.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153827.1 105 Q17RY6-2 105 100% 0 0

Chromosomal Locations for CCDS 59114.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 142700528 142700630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 142701600 142701713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 142703123 142703223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (318 nt):
ATGGCGCTGCTCGCCTTGCTGCTGGTCGTGGCCCTACCGCGGGTGTGGACAGACGCCAACCTGACTGCGA
GACAACGAGATCCAGAGGACTCCCAGCGAACGGACGAGGGTGACAATAGAGTGTGGTGTCATGTTTGTGA
GAGAGAAAACACTTTCGAGTGCCAGAACCCAAGGAGGTGCAAATGGACAGAGCCATACTGCGTTATAGCG
GCCGTGACAGTGCTCCGCTGGTTGTGCAGCGATGGAGAGACCCAAGCCAGAGGAGAAGCGGTTTCTCCTG
GAAGAGCCCATGCCCTTCTTTTACCTCAAGTGTTGTAA

Translation (105 aa):
MALLALLLVVALPRVWTDANLTARQRDPEDSQRTDEGDNRVWCHVCERENTFECQNPRRCKWTEPYCVIA
AVTVLRWLCSDGETQARGEAVSPGRAHALLLPQVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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