NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, June 25, 2024, starting at 8:00 a.m. EDT for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33355.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33355.2 Public Homo sapiens 2 ANKRD44 24 110 108 CCDS HistoryNCBI Gene:91526Re-query CCDS DB by CCDS ID:33355.2Re-query CCDS DB by GeneID:91526See the combined annotation on chromosome 2 in Sequence Viewer

Public Note for CCDS 33355.1
The coding region has been updated to represent an alternative splicing pattern that is more supported by the available transcript data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 33355.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409919.5 ENSP00000387233.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409919.5Link to Ensembl Protein Viewer:ENSP00000387233.1Re-query CCDS DB by Nucleotide ID:ENST00000409919Re-query CCDS DB by Protein ID:ENSP00000387233
Original member Current member NCBI NM_153697.3 NP_710181.2 Accepted alive Link to Nucleotide Sequence:NM_153697.3Link to Protein Sequence:NP_710181.2Re-query CCDS DB by Nucleotide ID:NM_153697Re-query CCDS DB by Protein ID:NP_710181Link to BLAST:NP_710181.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_710181.2 367 Q8N8A2-5 367 100% 0 0

Chromosomal Locations for CCDS 33355.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 197099812 197099930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197110766 197110844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197121332 197121544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197122650 197122792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197125381 197125468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197125837 197126037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197136592 197136662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197147027 197147105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197187023 197187106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197310578 197310604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGGCAGTGCTCAAACTCACCGACCAGCCACCATTGGTTCAGGCAATCTTCAGCGGTGATCCAGAGGAGA
TCCGGATGCTCATCCATAAAACTGAAGATGTGAATACTCTGGATTCTGAGAAACGAACCCCTCTTCATGT
GGCCGCATTTCTGGGAGATGCAGAGATCATTGAACTCCTGATTTTGTCAGGAGCTCGTGTAAATGCCAAG
GACAACATGTGGCTGACTCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAAGCAGTACAGGTTTTGA
TTAAGCACTCAGCTGATGTCAATGCAAGGGACAAGAACTGGCAGACCCCTCTTCATGTGGCAGCAGCCAA
CAAGGCTGTCAAATGTGCAGAAGTGATCATTCCCCTGCTGAGCAGTGTCAATGTCTCCGACCGAGGGGGG
CGCACAGCCTTGCACCATGCGGCTCTGAACGGCCACGTGGAGATGGTCAATTTACTCTTGGCCAAAGGGG
CAAATATCAATGCATTTGACAAGAAGGACCGGCGTGCTCTGCACTGGGCAGCATACATGGGCCACTTGGA
TGTTGTAGCATTGCTCATTAACCATGGCGCAGAAGTGACCTGTAAGGATAAGAAGGGTTATACCCCTCTG
CATGCTGCAGCCTCCAATGGACAGATTAATGTTGTCAAGCATCTCCTGAACCTGGGGGTGGAGATTGATG
AAATCAATGTCTATGGAAATACAGCGCTTCACATCGCCTGCTACAATGGACAGGATGCTGTGGTTAACGA
GTTGATTGACTACGGTGCTAACGTGAACCAGCCAAACAATAATGGGTTCACCCCTTTGCATTTTGCTGCT
GCCTCCACTCATGGTGCTTTGTGTCTTGAATTGTTAGTAAACAACGGGGCAGATGTTAACATTCAGAGTA
AAGATGGCAAAAGTCCACTGCACATGACAGCTGTCCATGGAAGGTTCACACGGTCACAGACCCTCATTCA
GAATGGAGGTGAAATTGACTGTGTGGATAAGGACGGCAACACTCCTCTCCATGTGGCTGCAAGATACGGT
CATGAGCTTTTGATTAACACCTTAATAACCAGCGGAGCTGACACAGCCAAGTAG

Translation (367 aa):
MAVLKLTDQPPLVQAIFSGDPEEIRMLIHKTEDVNTLDSEKRTPLHVAAFLGDAEIIELLILSGARVNAK
DNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNVSDRGG
RTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPL
HAAASNGQINVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDYGANVNQPNNNGFTPLHFAA
ASTHGALCLELLVNNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDCVDKDGNTPLHVAARYG
HELLINTLITSGADTAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH