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Report for CCDS87486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87486.1 Public Homo sapiens 7 HYCC1 24 110 108 CCDS HistoryNCBI Gene:84668Re-query CCDS DB by CCDS ID:87486.1Re-query CCDS DB by GeneID:84668See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87486.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409923.5 ENSP00000386246.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409923.5Link to Ensembl Protein Viewer:ENSP00000386246.1Re-query CCDS DB by Nucleotide ID:ENST00000409923Re-query CCDS DB by Protein ID:ENSP00000386246
Original member Current member NCBI NM_001363466.2 NP_001350395.1 Accepted alive Link to Nucleotide Sequence:NM_001363466.2Link to Protein Sequence:NP_001350395.1Re-query CCDS DB by Nucleotide ID:NM_001363466Re-query CCDS DB by Protein ID:NP_001350395Link to BLAST:NP_001350395.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350395.1 419 Q9BYI3-3 419 100% 0 0

Chromosomal Locations for CCDS 87486.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 22946979 22947247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22960256 22960415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22961235 22961322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22964415 22964531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22976210 22976305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22976693 22976808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22977341 22977421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22978269 22978448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22983944 22984045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22991061 22991111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGTTTACTTCAGAGAAAGGGGTTGTGGAGGAATGGTTGTCAGAGTTTAAGACATTACCAGAAACATCTT
TACCAAATTATGCCACAAATTTGAAAGACAAGAGTTCTTTAGTTTCATCTCTCTATAAAGTTATCCAGGA
GCCACAAAGTGAGTTGCTAGAACCTGTCTGTCACCAGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAG
TTGCTTCAATTTACGCTGCAATTTCTCCCAGAACTAATTTGGTGCTACCTTGCAGTCTCAGCCAGCAGAA
ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTCTAGGGGTTTACAATTTGGAAATAGTTGACAAACA
GGGACATACCAAAGTATTGAGTTTTACGATTCCATCTTTATCCAAACCATCTGTATACCATGAACCTTCC
AGCATTGGGTCCATGGCTCTGACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG
GACCTCATCCTCAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAAGTGTTGACATTCCTTTTGTTGTG
TTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGTTCAAGAATC
TGTGTTTGTGGATATCCTCGACAACATGTAAGAAAATATAAAGGTATAAGTAGCAGGATACCAGTTTCTT
CAGGATTCATGGTGCAAATGTTAACAGGGATTTATTTTGCCTTTTATAATGGAGAATGGGATCTAGCTCA
AAAAGCACTGGATGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGCTAAT
GCAATAAAGGCTTCATTGCCTCATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTG
AAATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTG
GAAAAGACATGAGCAACCTGACAACAATAATGATGCTACTGAATTGGGCATCCTTGTCATTCCTGAGATT
AGTGTCACAAATGTGGCCGGAGAGAGAACCGGGAATGGGGAAAAAGGCAGAACACTAGGAGAGATTGATG
CTCAGCATATACAGGGTGTGCAGGAAACAGCCACAGATCCTAGAACTGAGAGCAAAGGCTTGCCAGAGAT
CAGGAGGCAAAAATCTGTAAGAAAAATGATGGAGGATGGAATAAACTCACCTGGCAGAGTGCAGTTTTAG

Translation (419 aa):
MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQ
LLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHTKVLSFTIPSLSKPSVYHEPS
SIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRI
CVCGYPRQHVRKYKGISSRIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVAN
AIKASLPHGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHEQPDNNNDATELGILVIPEI
SVTNVAGERTGNGEKGRTLGEIDAQHIQGVQETATDPRTESKGLPEIRRQKSVRKMMEDGINSPGRVQF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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