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Report for CCDS76838.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76838.1 Public Homo sapiens 16 ACSM2A 24 110 108 CCDS HistoryNCBI Gene:123876Re-query CCDS DB by CCDS ID:76838.1Re-query CCDS DB by GeneID:123876See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76838.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417235.6 ENSP00000392169.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417235.6Link to Ensembl Protein Viewer:ENSP00000392169.2Re-query CCDS DB by Nucleotide ID:ENST00000417235Re-query CCDS DB by Protein ID:ENSP00000392169
Original member Current member NCBI NM_001308169.2 NP_001295098.1 Accepted alive Link to Nucleotide Sequence:NM_001308169.2Link to Protein Sequence:NP_001295098.1Re-query CCDS DB by Nucleotide ID:NM_001308169Re-query CCDS DB by Protein ID:NP_001295098Link to BLAST:NP_001295098.1

Chromosomal Locations for CCDS 76838.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20465577 20465727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20469512 20469719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20471073 20471216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20471536 20471689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20475362 20475441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20475650 20475773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20477369 20477449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20478576 20478677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20480573 20480700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20480822 20480921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20483058 20483177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20486574 20486678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGTGGAATTTCAGAGAACTGAGTGAAAACAGCCAGCAGGCAGCCAACGTCCTCTCGGGAGCCTGTGGCC
TGCAGCGTGGGGATCGTGTGGCAGTGGTGCTGCCCCGAGTGCCTGAGTGGTGGCTGGTGATCCTGGGCTG
CATTCGAGCAGGTCTCATCTTTATGCCTGGAACCATCCAGATGAAATCCACTGACATACTGTATAGGTTG
CAGATGTCTAAGGCCAAGGCTATTGTTGCTGGGGATGAAGTCATCCAAGAAGTGGACACAGTGGCATCTG
AATGTCCTTCTCTGAGAATTAAGCTACTGGTGTCTGAGAAAAGCTGTGATGGGTGGCTGAACTTCAAGAA
ACTACTAAATGAGGCATCCACCACTCATCACTGTGTGGAGACTGGAAGCCAGGAAGCATCTGCCATCTAC
TTCACTAGTGGGACCAGTGGTCTTCCCAAGATGGCAGAACATTCCTACTCGAGCCTGGGCCTCAAGGCCA
AGATGGATGCTGGTTGGACAGGCCTGCAAGCCTCTGATATAATGTGGACCATATCAGACACAGGTTGGAT
ACTGAACATCTTGTGCTCACTTATGGAACCTTGGGCATTAGGAGCATGCACATTTGTTCATCTCTTGCCA
AAGTTTGACCCACTGGTTATTCTAAAGACACTCTCCAGTTATCCAATCAAGAGTATGATGGGTGCCCCCA
TTGTTTACCGGATGTTGCTACAGCAGGATCTTTCCAGTTACAAGTTCCCCCATCTACAGAACTGCGTCAC
TGTAGGGGAGTCCCTTCTTCCAGAAACTCTGGAGAACTGGAGGGCCCAGACAGGACTGGACATCCGAGAA
TCCTATGGCCAGACAGAAACGGGATTAACTTGCATGGTTTCCAAGACAATGAAAATCAAACCAGGATACA
TGGGAACGGCTGCTTCCTGTTATGATGTACAGATCATAGATGATAAGGGCAACGTCCTGCCCCCCGGCAC
AGAAGGAGACATTGGCATCAGGGTCAAACCCATCAGGCCTATAGGCATCTTCTCTGGCTATGTGGACAAT
CCCGACAAGACAGCAGCCAACATTCGAGGAGACTTTTGGCTCCTTGGAGACCGGGGAATCAAAGATGAAG
ATGGGTATTTCCAGTTTATGGGACGGGCAAATGATATCATTAACTCCAGCGGGTACCGGATTGGACCCTC
GGAGGTAGAGAATGCACTGATGGAGCACCCTGCTGTGGTTGAGACGGCTGTGATCAGCAGCCCAGACCCC
GTCCGAGGAGAGGTGGTGAAGGCATTTGTGGTCCTGGCCTCGCAGTTCCTGTCCCATGACCCAGAACAGC
TCACCAAGGAGCTGCAGCAGCATGTGAAGTCAGTGACAGCCCCATACAAGTACCCAAGAAAGATAGAGTT
TGTCTTGAACCTGCCCAAGACTGTCACAGGGAAAATTCAACGAGCCAAGCTTCGAGACAAGGAGTGGAAG
ATGTCCGGAAAAGCCCGTGCGCAGTGA

Translation (498 aa):
MWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRL
QMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEASTTHHCVETGSQEASAIY
FTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLP
KFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSYKFPHLQNCVTVGESLLPETLENWRAQTGLDIRE
SYGQTETGLTCMVSKTMKIKPGYMGTAASCYDVQIIDDKGNVLPPGTEGDIGIRVKPIRPIGIFSGYVDN
PDKTAANIRGDFWLLGDRGIKDEDGYFQFMGRANDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDP
VRGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK
MSGKARAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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