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Report for CCDS6290.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6290.1 Public Homo sapiens 8 YWHAZ 24 110 108 CCDS HistoryNCBI Gene:7534Re-query CCDS DB by CCDS ID:6290.1Re-query CCDS DB by GeneID:7534See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6290.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000353245.7 ENSP00000309503.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000353245.7Link to Ensembl Protein Viewer:ENSP00000309503.3Re-query CCDS DB by Nucleotide ID:ENST00000353245Re-query CCDS DB by Protein ID:ENSP00000309503
Original member Current member EBI ENST00000395951.7 ENSP00000379281.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395951.7Link to Ensembl Protein Viewer:ENSP00000379281.3Re-query CCDS DB by Nucleotide ID:ENST00000395951Re-query CCDS DB by Protein ID:ENSP00000379281
Original member Current member EBI ENST00000395953.6 ENSP00000379283.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395953.6Link to Ensembl Protein Viewer:ENSP00000379283.2Re-query CCDS DB by Nucleotide ID:ENST00000395953Re-query CCDS DB by Protein ID:ENSP00000379283
Original member Current member EBI ENST00000395956.7 ENSP00000379286.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395956.7Link to Ensembl Protein Viewer:ENSP00000379286.3Re-query CCDS DB by Nucleotide ID:ENST00000395956Re-query CCDS DB by Protein ID:ENSP00000379286
Original member Current member EBI ENST00000395957.6 ENSP00000379287.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395957.6Link to Ensembl Protein Viewer:ENSP00000379287.2Re-query CCDS DB by Nucleotide ID:ENST00000395957Re-query CCDS DB by Protein ID:ENSP00000379287
Original member Current member EBI ENST00000395958.6 ENSP00000379288.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395958.6Link to Ensembl Protein Viewer:ENSP00000379288.2Re-query CCDS DB by Nucleotide ID:ENST00000395958Re-query CCDS DB by Protein ID:ENSP00000379288
Original member Current member EBI ENST00000419477.6 ENSP00000395114.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419477.6Link to Ensembl Protein Viewer:ENSP00000395114.2Re-query CCDS DB by Nucleotide ID:ENST00000419477Re-query CCDS DB by Protein ID:ENSP00000395114
Original member Current member EBI ENST00000457309.2 ENSP00000398599.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457309.2Link to Ensembl Protein Viewer:ENSP00000398599.1Re-query CCDS DB by Nucleotide ID:ENST00000457309Re-query CCDS DB by Protein ID:ENSP00000398599
Original member Current member NCBI NM_001135699.2 NP_001129171.1 Accepted alive Link to Nucleotide Sequence:NM_001135699.2Link to Protein Sequence:NP_001129171.1Re-query CCDS DB by Nucleotide ID:NM_001135699Re-query CCDS DB by Protein ID:NP_001129171Link to BLAST:NP_001129171.1
Original member Current member NCBI NM_001135700.2 NP_001129172.1 Accepted alive Link to Nucleotide Sequence:NM_001135700.2Link to Protein Sequence:NP_001129172.1Re-query CCDS DB by Nucleotide ID:NM_001135700Re-query CCDS DB by Protein ID:NP_001129172Link to BLAST:NP_001129172.1
Original member Current member NCBI NM_001135701.2 NP_001129173.1 Accepted alive Link to Nucleotide Sequence:NM_001135701.2Link to Protein Sequence:NP_001129173.1Re-query CCDS DB by Nucleotide ID:NM_001135701Re-query CCDS DB by Protein ID:NP_001129173Link to BLAST:NP_001129173.1
Original member Current member NCBI NM_001135702.2 NP_001129174.1 Accepted alive Link to Nucleotide Sequence:NM_001135702.2Link to Protein Sequence:NP_001129174.1Re-query CCDS DB by Nucleotide ID:NM_001135702Re-query CCDS DB by Protein ID:NP_001129174Link to BLAST:NP_001129174.1
Original member Current member NCBI NM_003406.4 NP_003397.1 Accepted alive Link to Nucleotide Sequence:NM_003406.4Link to Protein Sequence:NP_003397.1Re-query CCDS DB by Nucleotide ID:NM_003406Re-query CCDS DB by Protein ID:NP_003397Link to BLAST:NP_003397.1
Original member Current member NCBI NM_145690.3 NP_663723.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145690.3Link to Protein Sequence:NP_663723.1Re-query CCDS DB by Nucleotide ID:NM_145690Re-query CCDS DB by Protein ID:NP_663723Link to BLAST:NP_663723.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129171.1 245 P63104-1 245 100% 0 0
NP_001129172.1 245 P63104-1 245 100% 0 0
NP_001129173.1 245 P63104-1 245 100% 0 0
NP_001129174.1 245 P63104-1 245 100% 0 0
NP_003397.1 245 P63104-1 245 100% 0 0
NP_663723.1 245 P63104-1 245 100% 0 0

Chromosomal Locations for CCDS 6290.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 100920693 100920752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100923955 100924050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100924135 100924298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100924916 100925039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100948596 100948889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGGATAAAAATGAGCTGGTTCAGAAGGCCAAACTGGCCGAGCAGGCTGAGCGATATGATGACATGGCAG
CCTGCATGAAGTCTGTAACTGAGCAAGGAGCTGAATTATCCAATGAGGAGAGGAATCTTCTCTCAGTTGC
TTATAAAAATGTTGTAGGAGCCCGTAGGTCATCTTGGAGGGTCGTCTCAAGTATTGAACAAAAGACGGAA
GGTGCTGAGAAAAAACAGCAGATGGCTCGAGAATACAGAGAGAAAATTGAGACGGAGCTAAGAGATATCT
GCAATGATGTACTGTCTCTTTTGGAAAAGTTCTTGATCCCCAATGCTTCACAAGCAGAGAGCAAAGTCTT
CTATTTGAAAATGAAAGGAGATTACTACCGTTACTTGGCTGAGGTTGCCGCTGGTGATGACAAGAAAGGG
ATTGTCGATCAGTCACAACAAGCATACCAAGAAGCTTTTGAAATCAGCAAAAAGGAAATGCAACCAACAC
ATCCTATCAGACTGGGTCTGGCCCTTAACTTCTCTGTGTTCTATTATGAGATTCTGAACTCCCCAGAGAA
AGCCTGCTCTCTTGCAAAGACAGCTTTTGATGAAGCCATTGCTGAACTTGATACATTAAGTGAAGAGTCA
TACAAAGACAGCACGCTAATAATGCAATTACTGAGAGACAACTTGACATTGTGGACATCGGATACCCAAG
GAGACGAAGCTGAAGCAGGAGAAGGAGGGGAAAATTAA

Translation (245 aa):
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE
GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKG
IVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEES
YKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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