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Report for CCDS46256.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46256.1 Public Homo sapiens 2 RASGRP3 24 110 108 CCDS HistoryNCBI Gene:25780Re-query CCDS DB by CCDS ID:46256.1Re-query CCDS DB by GeneID:25780See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46256.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000403687.8 ENSP00000384192.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000403687.8Link to Ensembl Protein Viewer:ENSP00000384192.3Re-query CCDS DB by Nucleotide ID:ENST00000403687Re-query CCDS DB by Protein ID:ENSP00000384192
Original member Current member EBI ENST00000402538.7 ENSP00000385886.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402538.7Link to Ensembl Protein Viewer:ENSP00000385886.3Re-query CCDS DB by Nucleotide ID:ENST00000402538Re-query CCDS DB by Protein ID:ENSP00000385886
Original member Current member NCBI NM_001139488.2 NP_001132960.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001139488.2Link to Protein Sequence:NP_001132960.1Re-query CCDS DB by Nucleotide ID:NM_001139488Re-query CCDS DB by Protein ID:NP_001132960Link to BLAST:NP_001132960.1
Original member Current member NCBI NM_001349975.2 NP_001336904.1 Accepted alive Link to Nucleotide Sequence:NM_001349975.2Link to Protein Sequence:NP_001336904.1Re-query CCDS DB by Nucleotide ID:NM_001349975Re-query CCDS DB by Protein ID:NP_001336904Link to BLAST:NP_001336904.1
Original member Current member NCBI NM_001349976.2 NP_001336905.1 Accepted alive Link to Nucleotide Sequence:NM_001349976.2Link to Protein Sequence:NP_001336905.1Re-query CCDS DB by Nucleotide ID:NM_001349976Re-query CCDS DB by Protein ID:NP_001336905Link to BLAST:NP_001336905.1
Original member Current member NCBI NM_001349977.2 NP_001336906.1 Accepted alive Link to Nucleotide Sequence:NM_001349977.2Link to Protein Sequence:NP_001336906.1Re-query CCDS DB by Nucleotide ID:NM_001349977Re-query CCDS DB by Protein ID:NP_001336906Link to BLAST:NP_001336906.1
Original member Current member NCBI NM_170672.3 NP_733772.1 Accepted alive Link to Nucleotide Sequence:NM_170672.3Link to Protein Sequence:NP_733772.1Re-query CCDS DB by Nucleotide ID:NM_170672Re-query CCDS DB by Protein ID:NP_733772Link to BLAST:NP_733772.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001132960.1 690 Q8IV61-1 690 100% 0 0
NP_001336904.1 690 Q8IV61-1 690 100% 0 0
NP_001336905.1 690 Q8IV61-1 690 100% 0 0
NP_001336906.1 690 Q8IV61-1 690 100% 0 0
NP_733772.1 690 Q8IV61-1 690 100% 0 0

Chromosomal Locations for CCDS 46256.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 33515137 33515206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33516542 33516644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33519952 33520014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33520553 33520684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33521955 33522102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33523879 33524052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33524432 33524548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33527137 33527412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33534323 33534400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33539094 33539210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33543512 33543627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33549604 33549751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33555531 33555567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33558211 33558336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33558672 33559030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33562729 33562737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2073 nt):
ATGGGATCAAGTGGCCTTGGGAAAGCAGCAACATTAGATGAACTGCTGTGCACTTGCATTGAGATGTTTG
ATGACAATGGAGAGCTGGATAATAGTTATTTGCCAAGAATAGTTCTACTGATGCACCGATGGTATTTATC
TTCCACTGAATTGGCAGAAAAACTTCTCTGCATGTATCGAAATGCCACTGGAGAAAGCTGCAATGAATTT
CGATTAAAGATCTGCTACTTCATGAGGTACTGGATTCTGAAGTTTCCTGCAGAGTTTAATTTGGATCTTG
GTTTGATTCGTATGACTGAGGAATTTCGGGAAGTAGCTAGTCAACTAGGATATGAAAAACACGTCAGCCT
CATCGACATATCCAGCATTCCTTCCTATGACTGGATGAGAAGAGTCACACAGAGGAAAAAAGTATCCAAG
AAGGGAAAAGCCTGTCTGCTGTTTGACCATCTGGAGCCCATTGAATTGGCTGAGCACCTCACTTTTCTGG
AGCATAAATCTTTTAGAAGGATCTCATTCACTGATTACCAAAGCTATGTCATCCATGGCTGCCTGGAGAA
TAATCCAACCTTGGAAAGATCGATTGCTTTATTTAATGGAATCTCTAAGTGGGTCCAGTTGATGGTTCTT
AGCAAACCAACCCCCCAGCAAAGGGCAGAAGTCATCACAAAGTTTATCAATGTTGCAAAGAAGCTCCTTC
AGCTCAAAAATTTTAACACCCTGATGGCAGTGGTGGGAGGCCTCAGTCATAGTTCCATTTCACGCCTCAA
AGAGACCCATTCTCATCTTTCTTCAGAAGTTACAAAGAACTGGAATGAAATGACAGAGTTGGTCTCCTCC
AACGGCAATTACTGCAATTACCGCAAGGCCTTTGCCGACTGCGATGGCTTCAAAATCCCCATCCTTGGAG
TACACTTGAAAGACTTGATAGCTGTCCATGTCATTTTCCCAGACTGGACAGAGGAGAACAAAGTGAACAT
TGTGAAAATGCACCAGCTCTCCGTTACCCTGAGTGAACTAGTCTCCCTGCAGAATGCCTCTCACCACTTA
GAACCCAACATGGATTTGATCAACCTGCTCACGCTTTCCCTGGACCTCTATCACACTGAAGATGATATTT
ACAAACTGTCACTGGTGCTGGAGCCTAGAAATTCTAAATCGCAGCCTACCTCCCCTACGACGCCCAACAA
GCCTGTGGTACCCCTGGAGTGGGCATTAGGGGTGATGCCAAAGCCAGACCCCACGGTCATCAACAAGCAC
ATAAGGAAATTAGTGGAGTCTGTATTTAGAAACTATGATCACGACCATGATGGGTACATTTCCCAAGAGG
ACTTTGAAAGTATAGCTGCCAATTTTCCCTTCTTGGATTCCTTCTGTGTTCTGGACAAAGATCAGGATGG
CCTAATTAGTAAAGATGAAATGATGGCTTACTTCCTGAGAGCTAAATCCCAACTACACTGTAAAATGGGA
CCAGGATTTATCCATAATTTTCAGGAGATGACCTATCTCAAGCCAACCTTCTGCGAACACTGTGCGGGAT
TTCTCTGGGGCATAATCAAGCAAGGATACAAATGCAAAGACTGTGGAGCCAATTGTCACAAACAGTGCAA
AGACCTCCTGGTTCTGGCCTGCAGGAGATTTGCCCGGGCGCCCTCCTTGAGCAGTGGTCATGGGTCACTG
CCTGGAAGCCCCTCGCTGCCCCCAGCGCAGGATGAGGTGTTTGAGTTCCCTGGAGTCACTGCTGGACACA
GGGATTTAGACAGCAGAGCCATCACACTGGTTACAGGCTCTTCTCGCAAGATCTCTGTGAGGCTACAGAG
GGCCACCACCAGCCAGGCCACCCAGACTGAACCTGTCTGGTCAGAGGCTGGCTGGGGGGACTCGGGGTCC
CACACCTTCCCTAAAATGAAATCCAAGTTCCATGACAAAGCAGCAAAGGACAAAGGCTTTGCCAAATGGG
AAAATGAGAAGCCCAGGGTGCATGCTGGTGTGGATGTTGTAGACCGGGGCACGGAGTTTGAACTTGACCA
GGATGAAGGAGAAGAGACCAGACAGGATGGTGAGGATGGCTGA

Translation (690 aa):
MGSSGLGKAATLDELLCTCIEMFDDNGELDNSYLPRIVLLMHRWYLSSTELAEKLLCMYRNATGESCNEF
RLKICYFMRYWILKFPAEFNLDLGLIRMTEEFREVASQLGYEKHVSLIDISSIPSYDWMRRVTQRKKVSK
KGKACLLFDHLEPIELAEHLTFLEHKSFRRISFTDYQSYVIHGCLENNPTLERSIALFNGISKWVQLMVL
SKPTPQQRAEVITKFINVAKKLLQLKNFNTLMAVVGGLSHSSISRLKETHSHLSSEVTKNWNEMTELVSS
NGNYCNYRKAFADCDGFKIPILGVHLKDLIAVHVIFPDWTEENKVNIVKMHQLSVTLSELVSLQNASHHL
EPNMDLINLLTLSLDLYHTEDDIYKLSLVLEPRNSKSQPTSPTTPNKPVVPLEWALGVMPKPDPTVINKH
IRKLVESVFRNYDHDHDGYISQEDFESIAANFPFLDSFCVLDKDQDGLISKDEMMAYFLRAKSQLHCKMG
PGFIHNFQEMTYLKPTFCEHCAGFLWGIIKQGYKCKDCGANCHKQCKDLLVLACRRFARAPSLSSGHGSL
PGSPSLPPAQDEVFEFPGVTAGHRDLDSRAITLVTGSSRKISVRLQRATTSQATQTEPVWSEAGWGDSGS
HTFPKMKSKFHDKAAKDKGFAKWENEKPRVHAGVDVVDRGTEFELDQDEGEETRQDGEDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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