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Report for CCDS85061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85061.1 Public Mus musculus 6 Serbp1 23 108 98 CCDS HistoryNCBI Gene:66870Re-query CCDS DB by CCDS ID:85061.1Re-query CCDS DB by GeneID:66870See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85061.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000203436.2 ENSMUSP00000144713.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000203436.2Link to Ensembl Protein Viewer:ENSMUSP00000144713.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000203436Re-query CCDS DB by Protein ID:ENSMUSP00000144713
Original member Current member NCBI NM_001113564.1 NP_001107036.1 Accepted alive Link to Nucleotide Sequence:NM_001113564.1Link to Protein Sequence:NP_001107036.1Re-query CCDS DB by Nucleotide ID:NM_001113564Re-query CCDS DB by Protein ID:NP_001107036Link to BLAST:NP_001107036.1

Chromosomal Locations for CCDS 85061.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 67267097 67267409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 67271198 67271348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 67271887 67272027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 67272157 67272228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 67272819 67272938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 67277761 67277938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 67281648 67281821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 67283903 67283959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1206 nt):
ATGCCTGGGCACCTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGCTATTTGACGACG
AATCGGACCCTTTCGAGGTACTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGG
GGGCCCCGGGGCCAAGAGCGCGGCTCAGGCCGCGGCCCAGACCAACTCCAACGCGGCGGGCAAACAGTTG
CGTAAAGAGTCCCAGAAAGACCGCAAGAACCCGCTGCCCCCCAGCGTCGGCGTGGCCGACAAAAAGGAGG
AGACGCAGCCGCCGGTGGCGCTTAAGAAAGAAGGAATAAGGCGAGTTGGAAGAAGACCCGATCAACAACT
ACAGGGTGATGGGAAACTAATTGATAGGAGAGCAGAAAGGCGACCACCCCGTGAAAGAAGATTTGAAAAG
CCACTTGAAGAAAAAGGTGAAGGAGGTGAATTTTCAGTTGATAGACCGATTATCGAACGGCCTATCCGAG
GCCGAGGTGGTCTTGGAAGGGGTCGAGGAGGCCGTGGACGTGGAATGGGCCGAGGCGATGGATTTGATTC
TCGTGGCAAGCGTGAATTTGATAGGCATAGTGGAAGTGATAGATCTGGCCTGAAGCATGAGGACAAACGC
GGAGGTAGCGGCTCTCACAACTGGGGAACTGTCAAAGATGAATTAACAGAGTCACCCAAATACATTCAGA
AACAAATATCTTATAATTGCAGTGATTTGGATCAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGA
GCACCCTGTGGCAGATACTGAAAATAAGGAGAACGAAGTTGAAGAGGTTAAGGAAGAGGGTCCAAAAGAG
ATGACTCTGGATGAGTGGAAAGCTATTCAAAATAAAGACCGAGCAAAAGTAGAATTTAATATCCGAAAAC
CAAATGAAGGCGCCGATGGACAATGGAAAAAGGGATTTGTTCTGCATAAATCAAAAAGTGAAGAGGCTCA
TGCTGAAGATTCAGTTATGGACCATCATTTCCGGAAGCCAGCAAATGATATAACATCTCAACTGGAGATC
AATTTTGGAGACTTAGGCCGCCCAGGACGTGGTGGCAGAGGAGGACGTGGTGGGCGTGGGCGTGGTGGAC
GTCCAAACCGTGGCAGCAGGACTGATAAGTCAAGTGCTTCTGCTCCTGATGTAGATGACCCAGAGGCCTT
CCCAGCTCTGGCCTAA

Translation (401 aa):
MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQL
RKESQKDRKNPLPPSVGVADKKEETQPPVALKKEGIRRVGRRPDQQLQGDGKLIDRRAERRPPRERRFEK
PLEEKGEGGEFSVDRPIIERPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKR
GGSGSHNWGTVKDELTESPKYIQKQISYNCSDLDQSNVTEETPEGEEHPVADTENKENEVEEVKEEGPKE
MTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEI
NFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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