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Report for CCDS47994.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47994.1 Public Homo sapiens 9 NUTM2F 24 110 108 CCDS HistoryNCBI Gene:54754Re-query CCDS DB by CCDS ID:47994.1Re-query CCDS DB by GeneID:54754See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47994.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253262.9 ENSP00000253262.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253262.9Link to Ensembl Protein Viewer:ENSP00000253262.4Re-query CCDS DB by Nucleotide ID:ENST00000253262Re-query CCDS DB by Protein ID:ENSP00000253262
Original member Current member NCBI NM_017561.2 NP_060031.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017561.2Link to Protein Sequence:NP_060031.1Re-query CCDS DB by Nucleotide ID:NM_017561Re-query CCDS DB by Protein ID:NP_060031Link to BLAST:NP_060031.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060031.1 756 A1L443 756 100% 0 0

Chromosomal Locations for CCDS 47994.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 94318465 94319250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94319613 94319729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94320208 94320593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94321093 94321232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94322201 94322329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94325238 94325934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94328608 94328623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2271 nt):
ATGGCTTCAAATGGAGCATACCCAGTGCTGGGACCCGGCGTGACCGTGAACCCTGGCACCTCCCTGTCTG
TGTTCACGGCTCTGCCCTTTGCCACACCCGCTCCCGGCCCAGCACACAGGCCGCCCCTCGTGACTGCAGT
GGTTCCTCCAGCCGGCCCTCTGGTGCTCTCTGCCTTCCCCAGCACCCCTCTAGTGGCAGGACAGGATGGC
CGCGGCCCGAGTGGGGCCGGGGCTTCCAACGTCTTTGTCCAGATGAGGACAGAAGTGGGGCCTGTGAAGC
CCCCTCAGGCACAGACCTTGATCCTAACTCAGGCCCCCCTCGTCTGGCAGGCTCCAGGCACCCTCTGTGG
AGGTGTCATGTGTCCACCTCCCCTACTCCTGGCAGCTGCTCCTGGGGTGCCCGTTACCTCTGCCCAGGTG
GTTGGGGGCACCCAGGCCTGTGAGGGAGGCTGGTCCCATGGCCTTCCTCTTCCACCACCACCACCGGCTG
CCCAGGTGGCCCCCATCGTGTCCCCAGGGAACGCTAGGCCATGGCCACAAGGGGCTCATGGAGAGGGCAG
CCTGGCTCCCTCCCAGGCCAAGGCCCGGCCGGACGACTCCTGTAAACCCAAGAGTGTCTATGAGAACTTC
CGACTCTGGCAGCACTACAAGCCCCTGGCCCGGAGGCACCTTCCCCAGAGTCCTGACACTGAAGCGCTTT
CCTGCTTCCTCATCCCAGTTCTCCGATCCCTGGCCCGGCGGAAGCCCACCATGACGCTGGAGGAGGGACT
GTGGCAGGCCATGCGGGAATGGCAGCACACGAGCAACTTTGACCGGATGATCTTCTACGAGATGGCGGAA
AAGTTCCTGGAATTTGAGGCTGAGGAGGAGATGCAGATTCAGAAATCGCAGTGGATGAAGGGGCCCCAGA
GCCTGCCTCCTCCAGCCCCGCCGAGGCTTGAACCTCGAGGACCCCCTGCCCCTGAGGTGGTCAAGCAGCC
AGTGTACCTTCCCAGCAAGGATGGCCCCAAGGCCCCGACTGCCTGCCTGCCACCACCCAGGCCCCAGAGG
CCAGCGGAGACCAAGGCCCACCTGCCACCACCCAGGCCCCAGAGGCCAGCGGAGACCAACGCCCACCTGC
CACCACCCAGGCCCCAGAGGCCAGCGGAGACCAAGGTCCCTGAGGAGATCCCCCCTGAAGTGGTGCAGGA
GTATGTGGACATCATGGAGGAGCTGCTGGGGTCTCACCCTGGGGACACAGGGGAGCCTGAGGGACAACGG
GAAAAGGGCAAAGTGGAGCAGCCGCAGGAAGAGGACGGGATAACCTCAGACCCGGGCCTCCTGAGCTACA
TTGACAAGCTGTGTTCCCAGGAAGACTTTGTCACCAAGGTGGAGGCCGTCATTCACCCCCGATTCCTGGA
AGAATTGCTTTCCCCAGATCCACAGATGGATTTCTTGGCCCTAAGCCAGGAGCTGGAGCAGGAGGAAGGA
CTCACCCTTGCCCAGCTAGTGGAGAAGCGCCTCCTGTCCTTGAAGGAGAAAGGGTGCGGGAGGGCAGCCC
CTCGACATGGCACGGCCAGGTTGGACTCAAGTCCTTCTGAGTTTGCAGCTGGCCAAGAAGCAGCGAGAGA
GGTCCCTGACCCCCAACAAAGGGTCAGCGTGGAAACCTCCCCACCCCAGACAGCTGCCCAGGACCCTCAG
GGACAGGGCAGAGTGCGCACTGGCATGGCCAGGTCCGAAGACCCTGCTGTGCTTTTGGGATGTCAGGATT
CCCCCAGGCTGAAGGCTGTCCGGCCAACCTCTCCTCCCCAGGACCACAGACCCACCTGCCCCGGCCTGGG
GACCAAGGACGCCTTGGGTCTCCCTGGAGAGTCTCCTGTCAAGGAGTCACATGGGCTGGCTAAGGGGTCA
AGTGAGGAGACGGAACTCCCTGGCATGGTCTATGTCGTGGGTTCCCACCACAGGCTGAGGCCCTGGAGGC
TGTCCCAGAGCCCTGTCCCTTCCTCGGGCCTTCTCAGCCCAGGAGGGAGAGGACCCCAGGGAGCTCTTCA
GTCTCCATCTGCTCAGAAAAGAGGCCTCAGCCCATCACCTTCTCCTGCCAGCAAGTCCAAGAAGCGACCT
CTCTTTGGAAGCCCATCCCCTGCTGAAAAGACACCGCACCCAGGGCCTGGGCTCAGGGTCTCTGGGGAGC
AATCCCTGGCTTGGGGGCTGGGTGGCCCCTCACAGTCTCAAAAGAGAAAGGGTGACCCCTTGGCCTCCAG
GAGGAAGAAGAAGCGGCATTGTAGCCAGTAG

Translation (756 aa):
MASNGAYPVLGPGVTVNPGTSLSVFTALPFATPAPGPAHRPPLVTAVVPPAGPLVLSAFPSTPLVAGQDG
RGPSGAGASNVFVQMRTEVGPVKPPQAQTLILTQAPLVWQAPGTLCGGVMCPPPLLLAAAPGVPVTSAQV
VGGTQACEGGWSHGLPLPPPPPAAQVAPIVSPGNARPWPQGAHGEGSLAPSQAKARPDDSCKPKSVYENF
RLWQHYKPLARRHLPQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWQAMREWQHTSNFDRMIFYEMAE
KFLEFEAEEEMQIQKSQWMKGPQSLPPPAPPRLEPRGPPAPEVVKQPVYLPSKDGPKAPTACLPPPRPQR
PAETKAHLPPPRPQRPAETNAHLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGSHPGDTGEPEGQR
EKGKVEQPQEEDGITSDPGLLSYIDKLCSQEDFVTKVEAVIHPRFLEELLSPDPQMDFLALSQELEQEEG
LTLAQLVEKRLLSLKEKGCGRAAPRHGTARLDSSPSEFAAGQEAAREVPDPQQRVSVETSPPQTAAQDPQ
GQGRVRTGMARSEDPAVLLGCQDSPRLKAVRPTSPPQDHRPTCPGLGTKDALGLPGESPVKESHGLAKGS
SEETELPGMVYVVGSHHRLRPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPSPASKSKKRP
LFGSPSPAEKTPHPGPGLRVSGEQSLAWGLGGPSQSQKRKGDPLASRRKKKRHCSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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