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Report for CCDS10460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10460.1 Public Homo sapiens 16 RAB26 24 110 108 CCDS HistoryNCBI Gene:25837Re-query CCDS DB by CCDS ID:10460.1Re-query CCDS DB by GeneID:25837See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000210187.11 ENSP00000210187.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000210187.11Link to Ensembl Protein Viewer:ENSP00000210187.6Re-query CCDS DB by Nucleotide ID:ENST00000210187Re-query CCDS DB by Protein ID:ENSP00000210187
Original member Current member NCBI NM_014353.5 NP_055168.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014353.5Link to Protein Sequence:NP_055168.2Re-query CCDS DB by Nucleotide ID:NM_014353Re-query CCDS DB by Protein ID:NP_055168Link to BLAST:NP_055168.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055168.2 256 Q9ULW5-1 256 100% 0 0

Chromosomal Locations for CCDS 10460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 2148784 2148978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2149941 2150051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2151569 2151610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2151695 2151761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2151856 2151908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2152820 2152885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2152989 2153045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2153146 2153222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2153319 2153421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGTCCAGGAAGAAGACCCCCAAGAGCAAAGGGGCCAGCACCCCCGCTGCCTCCACGCTGCCCACCGCCA
ACGGGGCCCGACCGGCGCGCTCCGGGACTGCGCTTTCCGGCCCCGACGCGCCGCCCAACGGGCCCTTGCA
GCCCGGCCGGCCCTCGCTTGGCGGCGGTGTCGACTTCTACGACGTCGCCTTCAAGGTCATGCTGGTGGGG
GACTCGGGTGTGGGGAAGACCTGTCTGCTGGTGCGATTCAAGGATGGTGCTTTCCTGGCGGGGACCTTCA
TCTCCACCGTAGGCATTGACTTCCGGAACAAAGTTCTGGACGTGGATGGTGTGAAGGTGAAGCTGCAGAT
GTGGGACACAGCTGGTCAGGAGCGGTTCCGCAGTGTTACCCATGCCTACTACCGGGATGCTCATGCTCTG
CTGCTGCTCTACGATGTCACCAACAAGGCCTCCTTTGACAACATCCAGGCCTGGCTGACCGAGATCCACG
AGTACGCCCAGCACGACGTGGCGCTCATGCTGCTGGGGAACAAGGTGGACTCTGCCCATGAGCGTGTGGT
GAAGAGGGAGGACGGGGAGAAGCTGGCCAAGGAGTATGGACTGCCCTTCATGGAGACCAGCGCCAAGACG
GGCCTCAACGTGGACTTGGCCTTCACAGCCATAGCAAAGGAGTTGAAGCAGCGCTCCATGAAGGCTCCCA
GCGAGCCGCGCTTCCGGCTGCATGATTACGTTAAGAGGGAGGGTCGAGGGGCCTCCTGCTGCCGCCCTTG
A

Translation (256 aa):
MSRKKTPKSKGASTPAASTLPTANGARPARSGTALSGPDAPPNGPLQPGRPSLGGGVDFYDVAFKVMLVG
DSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHAL
LLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKT
GLNVDLAFTAIAKELKQRSMKAPSEPRFRLHDYVKREGRGASCCRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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