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Report for CCDS5896.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5896.1 Public Homo sapiens 7 ZNF212 24 110 108 CCDS HistoryNCBI Gene:7988Re-query CCDS DB by CCDS ID:5896.1Re-query CCDS DB by GeneID:7988See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5896.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335870.7 ENSP00000338572.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335870.7Link to Ensembl Protein Viewer:ENSP00000338572.2Re-query CCDS DB by Nucleotide ID:ENST00000335870Re-query CCDS DB by Protein ID:ENSP00000338572
Original member Current member NCBI NM_012256.4 NP_036388.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012256.4Link to Protein Sequence:NP_036388.2Re-query CCDS DB by Nucleotide ID:NM_012256Re-query CCDS DB by Protein ID:NP_036388Link to BLAST:NP_036388.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036388.2 495 Q9UDV6 495 100% 0 0

Chromosomal Locations for CCDS 5896.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 149239779 149239802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149250159 149250548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149250681 149250807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149252706 149252795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149253559 149254415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGCGGAGTCGGCGCCTGCTCGGCACAGGAGAAAACGACGCTCCACACCTTTAACTTCTTCCACACTTC
CT
TCACAAGCAACAGAGAAAAGCTCCTATTTTCAGACCACCGAGATTTCACTCTGGACGGTGGTGGCCGC
T
ATTCAGGCTGTGGAGAAGAAGATGGAGTCCCAGGCTGCCCGGCTACAGAGCCTGGAGGGGCGCACGGGG
ACA
GCCGAGAAGAAGCTGGCTGACTGCGAGAAGATGGCCGTGGAGTTCGGGAACCAGCTGGAGGGCAAGT
GG
GCCGTGCTGGGGACCCTGCTGCAGGAGTATGGGCTACTGCAGAGGCGGCTGGAGAACGTGGAGAACCT
G
CTGCGCAACAGGAACTTCTGGATCCTGCGGCTGCCCCCGGGCAGCAAGGGGGAGGCCCCCAAGGTGTCC
AGG
TCACTGGAGAATGATGGCGTCTGTTTCACCGAGCAGGAATGGGAGAATCTGGAGGATTGGCAGAAGG
AG
CTCTACAGAAACGTGATGGAGAGTAACTATGAGACACTGGTCTCTCTGAAGGTCCTTGGCCAGACAGA
G
GGAGAAGCGGAGTTGGGTACAGAGATGCTGGGTGACTTGGAAGAGGAAGGTCCTGGTGGTGCCCACCCA
G
CA
GGTGGGGTCATGATCAAACAGGAGCTACAGTATACACAGGAAGGCCCTGCGGATCTTCCTGGAGAGT
TC
TCATGCATTGCTGAAGAGCAGGCTTTCCTGAGCCCAGAGCAGACCGAACTCTGGGGTGGTCAGGGCAG
T
TCTGTCCTCTTGGAAACAGGTCCTGGGGACTCTACTCTAGAGGAGCCTGTTGGTAGTAGAGTTCCTAGC
AGC
AGCAGAACTGTGGGCTGCCCGAAGCAGAAATCTCATAGGCAGGTACAGCTGGACCAGGAATGTGGGC
AG
GGCCTGAAGCTGAAAAAGGACACTTCCCGCCCCTACGAATGTTCTGAGTGTGAGATCACCTTCCGCTA
T
AAGCAGCAGCTGGCCACACATCTGCGCAGCCACTCTGGGTGGGGGTCTTGTACACCTGAGGAGCCAGAG
GAG
AGCCTTAGGCCCAGGCCACGGCTGAAACCACAGACCAAAAAGGCCAAGCTGCATCAGTGTGATGTGT
GC
CTGAGGAGCTTCAGCTGCAAGGTGAGCCTGGTGACCCATCAGCGTTGCCACCTGCAGGAGGGGCCCAG
T
GCCGGCCAGCATGTCCAAGAGAGGTTCTCACCCAACAGCCTGGTTGCCCTGCCTGGCCACATCCCTTGG
AGG
AAAAGCCGGAGTTCCCTCATCTGTGGTTACTGTGGCAAGAGCTTCAGTCACCCATCTGACTTGGTGC
GG
CACCAGCGCATCCACACGGGTGAGCGGCCCTACAGCTGCACTGAGTGTGAGAAGAGCTTTGTCCAGAA
G
CAGCACCTCCTGCAGCACCAGAAGATCCACCAGCGGGAGCGGGGTGGGCTGGCCCTGGAGCCCGGAAGG
CCC
AATGGCCTGCTTTAA


Translation (495 aa):
MAESAPARHRRKRRSTPLTSSTLPSQATEKSSYFQTTEISLWTVVAAIQAVEKKMESQAARLQSLEGRTG
T
AEKKLADCEKMAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLRNRNFWILRLPPGSKGEAPK
VS
R
SLENDGVCFTEQEWENLEDWQKELYRNVMESNYETLVSL
KVLGQTEGEAELGTEMLGDLEEEGPGGAHP
A
GGVMIKQELQYTQEGPADLPGEFSCIAEEQAFLSPEQTELWGGQGSSVLLETGPGDSTLEEPVGSRVPS
S
SRTVGCPKQKSHRQVQLDQECGQGLKLKKDTSRPYECSECEITFRYKQQLATHLRSHSGWGSCTPEEPE
E
SLRPRPRLKPQTKKAKLHQCDVCLRSFSCKVSLVTHQRCHLQEGPSAGQHVQERFSPNSLVALPGHIPW
R
KSRSSLICGYCGKSFSHPSDLVRHQRIHTGERPYSCTECEKSFVQKQHLLQHQKIHQRERGGLALEPGR
P
NGLL




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 Genome Browser Links:   Ensembl Genome Browser
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