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Report for CCDS12493.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12493.1 Public Homo sapiens 19 ZFP82 24 110 108 CCDS HistoryNCBI Gene:284406Re-query CCDS DB by CCDS ID:12493.1Re-query CCDS DB by GeneID:284406See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12493.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392161.4 ENSP00000431265.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392161.4Link to Ensembl Protein Viewer:ENSP00000431265.1Re-query CCDS DB by Nucleotide ID:ENST00000392161Re-query CCDS DB by Protein ID:ENSP00000431265
Original member Current member NCBI NM_133466.4 NP_597723.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133466.4Link to Protein Sequence:NP_597723.1Re-query CCDS DB by Nucleotide ID:NM_133466Re-query CCDS DB by Protein ID:NP_597723Link to BLAST:NP_597723.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_597723.1 532 Q8N141 532 100% 0 0

Chromosomal Locations for CCDS 12493.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36392741 36394110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36405580 36405672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36407887 36408013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36409781 36409789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGGCCCTTCGATCAGTGATGTTCAGTGATGTATCCATAGACTTCTCTCCAGAAGAGTGGGAATACCTGG
ACTTGGAACAAAAGGACTTGTACAGAGATGTCATGTTGGAGAACTACAGCAACTTGGTCTCACTGGGATG
CTTCATTTCTAAACCAGATGTGATTTCCTCATTGGAGCAAGGAAAAGAGCCTTGGAAAGTTGTGAGGAAA
GGAAGAAGACAATATCCAGATTTGGAGACCAAGTATGAGACCAAGAAGTTATCTTTAGAAAATGACATTT
ATGAAATAAATTTATCCCAGTGGAAGATAATGGAAAGAATTGAAAACCATGGCCTTAAGGGTCTCATTTT
AAAAAATGATTGGGAATCCACAGGAAAAATTGAAGGACAGGAGAGACCTCAAGAAGGATACTTCAGTAGT
GTGAAAATGCCATCTGAAAAGGTGTCCTCTTACCAGAAACGCACATCTGTTACTCCACATCAGAGACTTC
ATTTTGTTGATAAACCCTATGAATGTAAGGAATGTGGGAAGGCGTTCAGAGTGCGCCAACAGCTTACTTT
TCATCACAGAATTCATACTGGTGAAAAACCGTATGAATGTAAGGAATGTGGGATGGCCTTCAGACAGACT
GCACACCTTACTCGACATCAGAGACTTCATTCTGGTGAAAAACTCTATGAATGTAAGGAATGTGGGGAAG
CTTTCATATGTGGTGCAGATCTTAGAGTACATCAGAAAATGCATATTGGTGAGAAGCCCTATGAATGTAA
AGAATGTGGGAAGGCTTTTAGGGTACGAGGACAACTTACTCTGCATCAGAGGATTCATACTGGTGAGAAA
CCCTATGTGTGTAAAGAGTGTGGAAAAGCCTTTAGACAGTACGCACACCTGACTCGGCATCAGAAGCTTA
ATAGTGCTGACAGGCTCTATGAATGCAAAGAATGTGGGAAGGCCTTTTTGTGTGGCTCTGGTCTTAGAGT
ACATCACAAACTTCATACTGGTGAGAAACCCTATGAATGTAAGGAATGCGGGAAGGCCTTTAGAGTGCGA
CAACAACTAACACTCCATCAGAGAATTCATACTGGTGAGAAACCCTATGAATGTAAGGAATGTGGAAAGA
CCTTTAGCCGTGGTTATCATCTTATTCTCCATCACAGAATTCATACTGGTGAAAAACCTTACGAATGTAA
GGAATGCTGGAAAGCCTTTAGTCGCTACTCACAACTTATTTCACATCAGAGTATTCATATTGGTGTTAAG
CCCTATGACTGTAAGGAATGCGGGAAGGCCTTCAGACTACTTTCACAACTCACACAGCATCAGAGTATTC
ATATTGGTGAGAAACCTTATAAATGTAAGGAATGTGGCAAGGCCTTTAGATTGCGCCAAAAACTTACTCT
ACATCAGAGCATTCATACTGGCGAAAAACCCTTTGAGTGTAAGGAATGTAGGAAGGCCTTTAGACTTAAT
TCATCCCTTATTCAACATCTGAGAATTCATTCTGGTGAGAAACCCTATGAATGTAAGGAATGTAAGAAGG
CCTTTAGGCAACATTCACACCTTACTCATCATCTGAAAATTCATAATGTAAAAATCTAA

Translation (532 aa):
MALRSVMFSDVSIDFSPEEWEYLDLEQKDLYRDVMLENYSNLVSLGCFISKPDVISSLEQGKEPWKVVRK
GRRQYPDLETKYETKKLSLENDIYEINLSQWKIMERIENHGLKGLILKNDWESTGKIEGQERPQEGYFSS
VKMPSEKVSSYQKRTSVTPHQRLHFVDKPYECKECGKAFRVRQQLTFHHRIHTGEKPYECKECGMAFRQT
AHLTRHQRLHSGEKLYECKECGEAFICGADLRVHQKMHIGEKPYECKECGKAFRVRGQLTLHQRIHTGEK
PYVCKECGKAFRQYAHLTRHQKLNSADRLYECKECGKAFLCGSGLRVHHKLHTGEKPYECKECGKAFRVR
QQLTLHQRIHTGEKPYECKECGKTFSRGYHLILHHRIHTGEKPYECKECWKAFSRYSQLISHQSIHIGVK
PYDCKECGKAFRLLSQLTQHQSIHIGEKPYKCKECGKAFRLRQKLTLHQSIHTGEKPFECKECRKAFRLN
SSLIQHLRIHSGEKPYECKECKKAFRQHSHLTHHLKIHNVKI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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