NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS13170.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13170.1 Public Homo sapiens 20 ENTPD6 24 110 108 CCDS HistoryNCBI Gene:955Re-query CCDS DB by CCDS ID:13170.1Re-query CCDS DB by GeneID:955See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13170.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376652.9 ENSP00000365840.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376652.9Link to Ensembl Protein Viewer:ENSP00000365840.4Re-query CCDS DB by Nucleotide ID:ENST00000376652Re-query CCDS DB by Protein ID:ENSP00000365840
Original member Current member NCBI NM_001247.5 NP_001238.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001247.5Link to Protein Sequence:NP_001238.3Re-query CCDS DB by Nucleotide ID:NM_001247Re-query CCDS DB by Protein ID:NP_001238Link to BLAST:NP_001238.3
Original member Current member NCBI NM_001322378.2 NP_001309307.2 Accepted alive Link to Nucleotide Sequence:NM_001322378.2Link to Protein Sequence:NP_001309307.2Re-query CCDS DB by Nucleotide ID:NM_001322378Re-query CCDS DB by Protein ID:NP_001309307Link to BLAST:NP_001309307.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001238.3 484 O75354-1 484 100% 0 0
NP_001309307.2 484 O75354-1 484 100% 0 0

Chromosomal Locations for CCDS 13170.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 25206537 25206590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25207076 25207397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25209849 25209925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25213263 25213406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25214867 25214942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25215676 25215711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25216648 25216736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25217502 25217581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25218550 25218614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25221232 25221333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25222838 25222978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25224101 25224157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25225205 25225317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25225499 25225597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGAAAAAAGGTATCCGTTATGAAACTTCCAGAAAAACGAGCTACATTTTTCAGCAGCCGCAGCACGGTC
CTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCGAAGGTGGCATACCCCCT
GGGGCTGTGTGTGGGCGTGTTCATCTATGTTGCCTACATCAAGTGGCACCGGGCCACCGCCACCCAGGCC
TTCTTCAGCATCACCAGGGCAGCCCCGGGGGCCCGGTGGGGTCAGCAGGCCCACAGCCCCCTGGGGACAG
CTGCAGACGGGCACGAGGTCTTCTACGGGATCATGTTTGATGCAGGAAGCACTGGCACCCGAGTACACGT
CTTCCAGTTCACCCGGCCCCCCAGAGAAACTCCCACGTTAACCCACGAAACCTTCAAAGCACTGAAGCCA
GGTCTTTCTGCCTATGCTGATGATGTTGAAAAGAGCGCTCAGGGAATCCGGGAACTACTGGATGTTGCTA
AACAGGACATTCCGTTCGACTTCTGGAAGGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCTTACGCCT
GTTACCTGGAGAAAAGGCCCAGAAGTTACTGCAGAAGGTGAAAAAAGTATTTAAAGCATCGCCTTTCCTT
GTAGGGGATGACTGTGTTTCCATCATGAACGGAACAGATGAAGGCGTTTCGGCGTGGATCACCATCAACT
TCCTGACAGGCAGCTTGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCGGAGGATCCAC
TCAGATCGCCTTCCTGCCACGCGTGGAGGGCACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGCACTG
CGGATGTTTAACAGGACCTACAAGCTCTATTCCTACAGCTACCTCGGGCTCGGGCTGATGTCGGCACGCC
TGGCGATCCTGGGCGGCGTGGAGGGGCAGCCTGCTAAGGATGGAAAGGAGTTGGTCAGCCCTTGCTTGTC
TCCCAGTTTCAAAGGAGAGTGGGAACACGCAGAAGTCACGTACAGGGTTTCAGGGCAGAAAGCAGCGGCA
AGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAAG
TGAAGCATGTGGACTTCTATGCTTTCTCCTACTATTACGACCTTGCAGCTGGTGTGGGCCTCATAGATGC
GGAGAAGGGAGGCAGCCTGGTGGTGGGGGACTTCGAGATCGCAGCCAAGTACGTGTGTCGGACCCTGGAG
ACACAGCCGCAGAGCAGCCCCTTCTCATGCATGGACCTCACCTACGTCAGCCTGCTACTCCAGGAGTTCG
GCTTTCCCAGGAGCAAAGTGCTGAAGCTCACTCGGAAAATTGACAATGTTGAGACCAGCTGGGCTCTGGG
GGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAGAGTCCAGCCTCATAG

Translation (484 aa):
MKKGIRYETSRKTSYIFQQPQHGPWQTRMRKISNHGSLRVAKVAYPLGLCVGVFIYVAYIKWHRATATQA
FFSITRAAPGARWGQQAHSPLGTAADGHEVFYGIMFDAGSTGTRVHVFQFTRPPRETPTLTHETFKALKP
GLSAYADDVEKSAQGIRELLDVAKQDIPFDFWKATPLVLKATAGLRLLPGEKAQKLLQKVKKVFKASPFL
VGDDCVSIMNGTDEGVSAWITINFLTGSLKTPGGSSVGMLDLGGGSTQIAFLPRVEGTLQASPPGYLTAL
RMFNRTYKLYSYSYLGLGLMSARLAILGGVEGQPAKDGKELVSPCLSPSFKGEWEHAEVTYRVSGQKAAA
SLHELCAARVSEVLQNRVHRTEEVKHVDFYAFSYYYDLAAGVGLIDAEKGGSLVVGDFEIAAKYVCRTLE
TQPQSSPFSCMDLTYVSLLLQEFGFPRSKVLKLTRKIDNVETSWALGAIFHYIDSLNRQKSPAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH