NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS44895.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44895.1 Public Homo sapiens 12 KRT3 24 110 108 CCDS HistoryNCBI Gene:3850Re-query CCDS DB by CCDS ID:44895.1Re-query CCDS DB by GeneID:3850See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44895.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417996.2 ENSP00000413479.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000417996.2Link to Ensembl Protein Viewer:ENSP00000413479.2Re-query CCDS DB by Nucleotide ID:ENST00000417996Re-query CCDS DB by Protein ID:ENSP00000413479
Original member Current member NCBI NM_057088.3 NP_476429.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_057088.3Link to Protein Sequence:NP_476429.2Re-query CCDS DB by Nucleotide ID:NM_057088Re-query CCDS DB by Protein ID:NP_476429Link to BLAST:NP_476429.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_476429.2 628 P12035 628 100% 0 0

Chromosomal Locations for CCDS 44895.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 52790042 52790358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52790838 52790872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52791206 52791426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52791691 52791816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52792239 52792403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52792711 52792806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52793163 52793223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52794111 52794331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52795398 52796042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1887 nt):
ATGAGCAGACAAGCCAGCAAGACATCTGGTGGCGGGAGCCAGGGTTTCTCCGGCCGCTCTGCTGTGGTCT
CCGGCAGCAGCAGGATGAGCTGTGTGGCCCACTCTGGGGGAGCTGGCGGAGGGGCCTATGGCTTCCGGAG
CGGAGCAGGTGGCTTTGGCAGTCGCAGCCTCTACAACCTGGGCGGCAACAAGAGCATCTCCATCAGCGTG
GCAGCTGGCGGCTCCCGGGCTGGAGGCTTTGGGGGAGGGCGGAGCAGCTGTGCCTTTGCAGGTGGCTATG
GAGGTGGCTTTGGGAGCGGCTATGGAGGTGGCTTTGGTGGTGGCTTTGGTGGTGGCAGAGGAATGGGAGG
TGGCTTTGGTGGAGCTGGTGGCTTTGGAGGGGCTGGTGGCTTTGGAGGGGCTGGTGGCTTTGGTGGTCCT
GGTGGCTTTGGTGGGTCTGGTGGCTTTGGTGGGCCTGGCAGCTTGGGCAGTCCTGGTGGCTTTGGCCCTG
GGGGCTTTCCTGGGGGAATTCAGGAAGTGACTATCAACCAGAGTCTCCTGCAGCCCCTCAATGTGGAGAT
CGACCCCCAGATTGGGCAAGTAAAGGCCCAGGAGCGGGAACAGATCAAGACCCTCAACAACAAGTTTGCC
TCCTTCATTGACAAGGTGCGGTTCCTGGAGCAACAGAACAAAGTCCTGGAGACCAAGTGGAACCTGCTCC
AGCAGCAGGGCACAAGTTCCATCTCAGGCACAAACAACCTTGAGCCTCTTTTTGAGAATCACATCAACTA
CCTGCGGAGCTACCTGGACAACATCCTCGGGGAGAGAGGGCGCCTGGACTCTGAGCTGAAGAACATGGAG
GACCTGGTGGAAGACTTCAAGAAGAAATATGAGGATGAAATCAATAAACGTACAGCTGCTGAGAATGAAT
TTGTGACTCTGAAGAAGGATGTGGACAGTGCCTATATGAACAAGGTGGAGCTTCAGGCCAAAGTGGATGC
CTTGATAGATGAGATCGACTTCTTAAGGACCCTCTACGACGCTGAGCTATCTCAGATGCAGAGCCACATC
AGTGACACATCTGTGGTGCTGTCCATGGACAATAATCGCTCCCTGGACCTGGACAGCATCATTGCTGAAG
TTCGTGCACAGTATGAGGATATCGCTCAGAGAAGCAAGGCCGAAGCTGAGGCCCTGTACCAGACCAAGTT
GGGGGAGCTGCAGACCACGGCTGGCAGGCATGGGGATGACCTAAGAAATACCAAGAGCGAGATCATAGAG
CTCAACAGAATGATCCAGAGGCTGCGGGCAGAGATCGAGGGTGTCAAGAAGCAGAATGCCAACCTGCAGA
CGGCCATTGCCGAGGCCGAGCAGCATGGAGAGATGGCCCTCAAGGATGCCAATGCCAAGCTCCAAGAGCT
GCAGGCTGCTCTACAGCAGGCGAAGGATGACCTGGCGCGGCTGCTACGTGACTACCAGGAGCTGATGAAT
GTCAAGCTGGCCCTGGACGTGGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGTACAGGATGT
CTGGAGAGTGTCCGAGTGCTGTCAGCATCTCCGTGGTCAGCAGCAGCACGACTTCCGCCTCCGCAGGTGG
CTATGGAGGAGGTTACGGCGGAGGCATGGGCGGTGGTTTAGGAGGTGGCTTCAGTGCGGGCGGCGGCTCA
GGCAGTGGCTTTGGCCGGGGAGGCGGCGGTGGAATCGGCGGTGGATTTGGCGGCGGCAGCAGCGGTTTCA
GCGGTGGCAGCGGCTTTGGCTCCATCTCTGGCGCCCGCTATGGAGTCAGTGGCGGGGGCTTCAGCTCGGC
CAGCAACCGGGGCGGCAGCATCAAGTTCTCCCAGTCCTCCCAGTCCTCCCAGCGCTACTCCAGATAA

Translation (628 aa):
MSRQASKTSGGGSQGFSGRSAVVSGSSRMSCVAHSGGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISV
AAGGSRAGGFGGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGP
GGFGGSGGFGGPGSLGSPGGFGPGGFPGGIQEVTINQSLLQPLNVEIDPQIGQVKAQEREQIKTLNNKFA
SFIDKVRFLEQQNKVLETKWNLLQQQGTSSISGTNNLEPLFENHINYLRSYLDNILGERGRLDSELKNME
DLVEDFKKKYEDEINKRTAAENEFVTLKKDVDSAYMNKVELQAKVDALIDEIDFLRTLYDAELSQMQSHI
SDTSVVLSMDNNRSLDLDSIIAEVRAQYEDIAQRSKAEAEALYQTKLGELQTTAGRHGDDLRNTKSEIIE
LNRMIQRLRAEIEGVKKQNANLQTAIAEAEQHGEMALKDANAKLQELQAALQQAKDDLARLLRDYQELMN
VKLALDVEIATYRKLLEGEEYRMSGECPSAVSISVVSSSTTSASAGGYGGGYGGGMGGGLGGGFSAGGGS
GSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSISGARYGVSGGGFSSASNRGGSIKFSQSSQSSQRYSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH