NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31302.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31302.1 Public Homo sapiens 10 C10orf120 24 110 108 CCDS HistoryNCBI Gene:399814Re-query CCDS DB by CCDS ID:31302.1Re-query CCDS DB by GeneID:399814See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31302.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329446.5 ENSP00000331012.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329446.5Link to Ensembl Protein Viewer:ENSP00000331012.4Re-query CCDS DB by Nucleotide ID:ENST00000329446Re-query CCDS DB by Protein ID:ENSP00000331012
Original member Current member NCBI NM_001010912.4 NP_001010912.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010912.4Link to Protein Sequence:NP_001010912.1Re-query CCDS DB by Nucleotide ID:NM_001010912Re-query CCDS DB by Protein ID:NP_001010912Link to BLAST:NP_001010912.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010912.1 335 Q5SQS8 335 100% 0 0

Chromosomal Locations for CCDS 31302.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 122697733 122698488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122699337 122699412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122699615 122699790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1008 nt):
ATGATCAGAGAATGGAAGAATGACTGTCAGAGGATTGAAAAACAGAGGGCTAGTGACACAATGGTGCAAG
AAAGGAAGAATGAAAAGCCAGTTAGAATATTTAATACCAACTCTTCCTTTCAGGATCAAGCCCCAACGTG
TTGCCAAGAGGATCTGAGTTCTGCTTCACCGTTGCGGATATGGAGCAAATTCTACAGATCAGACCCACGG
ATTGCCCTTGGGAAATACTCCCCCTTGGAAAAAGAGATCCTACGTCTAGGTGGCATTCACACCATAGCAG
CAAGAAGGCTTTTGGCTTACAAGCAAGAGGAAGAATGCAGAATGCTCAAGGAACTACAGTTGCTGTCTCC
GGACTACAAACAAGCAATGGAGTATAAAAAGAAACATTCCTCTCCTTGTGCTATTTGTGTACCCCTAGAA
AAAATATGGACAGCAAAGGTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAACGAGAGCAGGTGAACG
TCAGTAAGCACATAGAGAGGATGAGGCTTGCTCGGGCTCTGGGAAATCATCAGCCTTTACCCTACATTGA
AAGGTTTACACGCTCCTCATTTCTGTCTGGGGTGGGCCTGGGTCCAATGGCAAAAAATAAGGCCAGACGA
AAGGAAGACAACTATGACACCCATAATTGTGATGATGCCAACCAAGATAAGAAAGAGGAGGCAGAGGGAA
AAAACACAAAAAGACGAGAAATAAAAATGAATGTAGTTTTCAAGTCAAAAGAACCAAAAAAATGTTTAAC
ATACCATGGAAATGATCGCAAATCATTCCTCCCCGCAAAGAAACCGGAACGGTCCATCGCAGGCCTAACA
AACCGAAATCTTTTCTGCATATCAGAATTCCCTGGTGACTTAATGCTAATGAATCAGGATTTTATATCAC
GGAGAGACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGGAAAGAGCGCAT
GCGTAAAGCAACTCCTTATCATTATTAA

Translation (335 aa):
MIREWKNDCQRIEKQRASDTMVQERKNEKPVRIFNTNSSFQDQAPTCCQEDLSSASPLRIWSKFYRSDPR
IALGKYSPLEKEILRLGGIHTIAARRLLAYKQEEECRMLKELQLLSPDYKQAMEYKKKHSSPCAICVPLE
KIWTAKVIAPLEAFKMPQREQVNVSKHIERMRLARALGNHQPLPYIERFTRSSFLSGVGLGPMAKNKARR
KEDNYDTHNCDDANQDKKEEAEGKNTKRREIKMNVVFKSKEPKKCLTYHGNDRKSFLPAKKPERSIAGLT
NRNLFCISEFPGDLMLMNQDFISRRDHFSDLVKTYSLEEESIWKERMRKATPYHY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH