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Report for CCDS13961.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13961.1 Public Homo sapiens 22 MICALL1 24 110 108 CCDS HistoryNCBI Gene:85377Re-query CCDS DB by CCDS ID:13961.1Re-query CCDS DB by GeneID:85377See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13961.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000215957.10 ENSP00000215957.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000215957.10Link to Ensembl Protein Viewer:ENSP00000215957.6Re-query CCDS DB by Nucleotide ID:ENST00000215957Re-query CCDS DB by Protein ID:ENSP00000215957
Original member Current member NCBI NM_033386.4 NP_203744.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033386.4Link to Protein Sequence:NP_203744.1Re-query CCDS DB by Nucleotide ID:NM_033386Re-query CCDS DB by Protein ID:NP_203744Link to BLAST:NP_203744.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_203744.1 863 Q8N3F8 863 100% 0 0

Chromosomal Locations for CCDS 13961.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37906423 37906568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37911952 37912000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37912351 37912492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37917707 37917795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37919036 37919178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37921972 37922426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37924660 37924717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37925661 37926043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37927411 37927826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37931799 37931933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37932553 37932679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37932798 37932888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37933039 37933112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37937080 37937194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37937746 37937792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37940709 37940830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2592 nt):
ATGGCTGGGCCGCGGGGCGCGCTGCTGGCCTGGTGCCGCCGCCAGTGCGAGGGCTACCGCGGCGTGGAGA
TCCGCGACCTGAGCAGCTCCTTCCGGGACGGCCTGGCCTTCTGCGCCATCCTGCACCGGCACCGGCCCGA
CCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGGCCTTTGAAGTGGCT
GAGAAGGAGCTGGGGATCCCCGCTCTCCTGGACCCCAATGACATGGTCTCCATGAGCGTCCCTGACTGCC
TCAGCATCATGACCTATGTGTCCCAGTATTACAACCACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCC
ACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGATGTG
GCTCAGGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGT
GCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCA
CTGCTTCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGGCTTATGAGAATGGGCCTGAGGAGGGC
ACCTTTGTGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGACACGGTCGGGGACCAGGCCTGGGCCCT
TCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCC
CAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGATGGACCCAAGGCCAGCCCTGAGGCCCGGCCGCAGATC
CCTACCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGCCAGCCCCCCTGCGGGCCGCCCCACCCCTG
CCCCCAGGAAGGCCTCTGAGAGCACCACCCCAGCACCCCCCACGCCCCGGCCCCGCTCCAGTCTGCAGCA
GGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGAGACTGCACGAACTGCCTGTCCCC
AAGCCGAGGGGGACACCGAAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGACCCCCCATGGATCACGC
TGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAAGCCA
GGACAGCAGGCAGGTGGAGAATGGAGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG
TCCAAACCCTATAACCCCTTTGAGGAGGAGGAGGAGGACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCC
TGGCCACCAGCCCTGCCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTGGTACGGCATCAC
CCCTACCAGCAGCCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGCTCTC
CACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCC
TGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTC
CTCAGAGCCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTG
GCCTCCTCTGGGGAACTAGTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGCCCTGGCCTTGCCCCCA
GGACCAGGGGCAGCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTT
GGTTGGAGACAGGAGCCCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTGC
AAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGGGAT
CCAAGCCAGTGAGGCCACCTGCCCCTGGACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCA
GTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCAC
CGTGGGGTGCTGCTGGAGGAGAAGCTGCGTGGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGG
ACTGGTTCAAGCTCATCCACGAGAAGCACCTACTGGTGCGGCGAGAGTCCGAGCTCATCTATGTCTTCAA
GCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCTCCGGTGCCTCCTCAATAAGCCAGAA
AAGGACTGGACGGAGGAGGACCGGGCCCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCTCATTGAGC
AGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGAAGACAAGATGTTGGA
AGCCATGATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAAG
ACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCT
AA

Translation (863 aa):
MAGPRGALLAWCRRQCEGYRGVEIRDLSSSFRDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRLAFEVA
EKELGIPALLDPNDMVSMSVPDCLSIMTYVSQYYNHFCSPGQAGVSPPRKGLAPCSPPSVAPTPVEPEDV
AQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRCSSTLLPGAYENGPEEG
TFVCAEHCARLGPGTRSGTRPGPFSQPKQQHQQQLAEDAKDVPGGGPSSSAPAGAEADGPKASPEARPQI
PTKPRVPGKLQELASPPAGRPTPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHELPVP
KPRGTPKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSSSPGPPSQDSRQVENGGTEEVAQPSPTASLE
SKPYNPFEEEEEDKEEEAPAAPSLATSPALGHPESTPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLAL
HASRLSHSEPPSATPSPALSVESLSSESASQTAGAELLEPPAVPKSSSEPAVHAPGTPGNPVSLSTNSSL
ASSGELVEPRVEQMPQASPGLAPRTRGSSGPQPAKPCSGATPTPLLLVGDRSPVPSPGSSSPQLQVKSSC
KENPFNRKPSPAASPATKKATKGSKPVRPPAPGHGFPLIKRKVQADQYIPEEDIHGEMDTIERRLDALEH
RGVLLEEKLRGGLNEGREDDMLVDWFKLIHEKHLLVRRESELIYVFKQQNLEQRQADVEYELRCLLNKPE
KDWTEEDRAREKVLMQELVTLIEQRNAIINCLDEDRQREEEEDKMLEAMIKKKEFQREAEPEGKKKGKFK
TMKMLKLLGNKRDAKSKSPRDKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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