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Report for CCDS45460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45460.1 Public Homo sapiens 16 ZNF771 24 110 108 CCDS HistoryNCBI Gene:51333Re-query CCDS DB by CCDS ID:45460.1Re-query CCDS DB by GeneID:51333See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319296.10 ENSP00000323945.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319296.10Link to Ensembl Protein Viewer:ENSP00000323945.5Re-query CCDS DB by Nucleotide ID:ENST00000319296Re-query CCDS DB by Protein ID:ENSP00000323945
Original member Current member EBI ENST00000434417.1 ENSP00000416197.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434417.1Link to Ensembl Protein Viewer:ENSP00000416197.1Re-query CCDS DB by Nucleotide ID:ENST00000434417Re-query CCDS DB by Protein ID:ENSP00000416197
Original member Current member NCBI NM_001142305.2 NP_001135777.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001142305.2Link to Protein Sequence:NP_001135777.1Re-query CCDS DB by Nucleotide ID:NM_001142305Re-query CCDS DB by Protein ID:NP_001135777Link to BLAST:NP_001135777.1
Original member Current member NCBI NM_016643.4 NP_057727.2 Accepted alive Link to Nucleotide Sequence:NM_016643.4Link to Protein Sequence:NP_057727.2Re-query CCDS DB by Nucleotide ID:NM_016643Re-query CCDS DB by Protein ID:NP_057727Link to BLAST:NP_057727.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135777.1 317 Q7L3S4 317 100% 0 0
NP_057727.2 317 Q7L3S4 317 100% 0 0

Chromosomal Locations for CCDS 45460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30408054 30408194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30417555 30418367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGCCTGGCGAACAGCAGGCAGAGGAAGAGGAGGAGGAAGAGATGCAGGAGGAGATGGTGCTGCTGGTGA
AGGGTGAGGAGGATGAGGGTGAGGAGAAGTATGAGGTGGTGAAACTCAAGATCCCCATGGACAACAAGGA
GGTCCCGGGCGAGGCGCCCGCGCCGTCCGCCGACCCGGCGCGTCCCCACGCGTGCCCCGACTGCGGCCGC
GCCTTCGCGCGCCGCTCCACGCTGGCGAAGCACGCGCGCACGCACACGGGCGAACGGCCCTTCGGGTGCA
CCGAGTGCGGGCGGCGCTTCTCACAGAAGTCGGCGCTGACCAAACACGGCCGCACGCACACGGGCGAGCG
GCCCTACGAGTGCCCCGAGTGCGACAAACGCTTCTCGGCCGCCTCGAACCTGCGGCAGCACCGGCGGCGG
CACACGGGCGAGAAGCCGTACGCATGCGCGCACTGCGGCCGCCGCTTCGCGCAGAGCTCCAACTACGCAC
AGCACCTGCGCGTGCACACGGGCGAGAAGCCGTACGCGTGCCCGGACTGCGGACGCGCCTTTGGCGGCAG
CTCGTGCCTGGCGCGCCACCGACGCACGCACACGGGCGAGCGGCCCTACGCTTGCGCCGACTGCGGCACG
CGCTTCGCTCAGAGCTCGGCGCTGGCCAAGCACCGGCGCGTGCACACGGGCGAGAAGCCGCACCGCTGCG
CTGTGTGTGGCCGTCGCTTCGGCCACCGCTCCAACCTGGCGGAGCACGCGCGCACGCACACAGGCGAGCG
GCCCTACCCCTGCGCCGAGTGCGGCCGCCGCTTCCGCCTAAGCTCGCACTTCATTCGCCACCGACGCGCG
CACATGCGGCGCCGCCTGTATATTTGCGCCGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCGCCACGG
CCGCCACTGCCACCGAGCGTTGCCCGGAGTGTGAGGGCAGCTGA

Translation (317 aa):
MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEVPGEAPAPSADPARPHACPDCGR
AFARRSTLAKHARTHTGERPFGCTECGRRFSQKSALTKHGRTHTGERPYECPECDKRFSAASNLRQHRRR
HTGEKPYACAHCGRRFAQSSNYAQHLRVHTGEKPYACPDCGRAFGGSSCLARHRRTHTGERPYACADCGT
RFAQSSALAKHRRVHTGEKPHRCAVCGRRFGHRSNLAEHARTHTGERPYPCAECGRRFRLSSHFIRHRRA
HMRRRLYICAGCGRDFKLPPGATAATATERCPECEGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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