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Report for CCDS36083.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36083.1 Public Mus musculus 10 Myo1a 23 108 98 CCDS HistoryNCBI Gene:432516Re-query CCDS DB by CCDS ID:36083.1Re-query CCDS DB by GeneID:432516See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36083.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000079590.6 ENSMUSP00000078540.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000079590.6Link to Ensembl Protein Viewer:ENSMUSP00000078540.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000079590Re-query CCDS DB by Protein ID:ENSMUSP00000078540
Original member Current member NCBI NM_001081219.2 NP_001074688.1 Accepted alive Link to Nucleotide Sequence:NM_001081219.2Link to Protein Sequence:NP_001074688.1Re-query CCDS DB by Nucleotide ID:NM_001081219Re-query CCDS DB by Protein ID:NP_001074688Link to BLAST:NP_001074688.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074688.1 1043 O88329 1043 100% 0 0

Chromosomal Locations for CCDS 36083.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 127705256 127705369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127705466 127705581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127705824 127705918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127706820 127706924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127707127 127707173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127707354 127707417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127707618 127707716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127710150 127710253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127710374 127710521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127710878 127710996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127711084 127711170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127712584 127712649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127712763 127712867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127713721 127713783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127713985 127714185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127714326 127714552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127714881 127715081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127715250 127715343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127715632 127715781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127715877 127715945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127716288 127716362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127718512 127718646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127719251 127719357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127719633 127719765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127719868 127720020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127720153 127720280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127720593 127720719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3132 nt):
ATGCCTCTCCTGGAAGGTCCCGTGGGGGTGGAAGACCTCATCCTCCTGGAGCCCCTAGATGAGGAGTCTC
TGATCAAGAACCTCCAACTCCGTTATGAAAACAAAGAGATTTATACATACATTGGGAATGTGGTGATCTC
AATGAACCCCTACGAGCAGCTTCCCATCTATGGACCAGAGTTCATTGCCAAATACCGGGACTATACTTTC
TATGAGCTGAAGCCTCACATCTATGCTTTGGCAAATGTGGCCTACCAGTCACTGAAGGATCGGGACCGGG
ACCAGTGTATCCTCATCACAGGCGAGAGTGGAGCTGGCAAGACTGAGGCGAGTAAGCTAGTGATGTCCTA
CGTGGCTGCTGTCTGTGGGAAAGGAGAGCAGGTGAACTCTGTGAAGGAGCAGCTGCTTCAGTCAAACCCA
GTGCTGGAAGCATTTGGCAATGCCAAGACCATCCGCAATAACAACTCCTCTCGATTTGGAAAGTACATGG
ACATCGAGTTTGACTTCAAAGGGTCCCCCCTGGGCGGTGTCATCACCAACTATCTGCTTGAGAAGTCCCG
AGTGGTGAAGCAACTCAAAGGGGAGAGGAATTTCCATATCTTCTATCAACTGCTGGCTGGAGCAGACGCA
CAGCTGCTGAAGGCCCTAAAGCTTGAGGAGGACACGAGTGTATACGGCTACCTGAATGGGGAGGTGTCCA
AGGTGAACGGTATGGACGACGCCTCCAACTTCAGGGCTGTGCAGCATGCGATGTCAGTGATTGGCTTCTC
AGAGGAGGAAATTAGACAAGTGCTGGAGGTGACAGCCCTGGTGCTGAAGCTGGGGAACGTGAAGCTGACA
GACGAGTTCCAGGCCAATGGGATCCCAGCCAGTGGCATCTGTGATGGGAAAGGTATTCAGGAGATTGGGG
AGATGATGGGCTTGAACTCTACGGAACTAGAGAGAGCGCTGTGCTCAAGAACTATGGAGACAGGCAAAGA
GAAGGTGGTCACGGTGCTGAATGTCACACAGGCTCAATATGCTCGGGATGCCCTGGCAAAGAATATTTAC
AGCCGCCTCTTCGACTGGATAGTGAAACGCATCAACGAGAGCATCAAGGTGGGCACTGGGGAGAAGAAGA
AGGTTATGGGGGTCCTGGATATCTACGGCTTTGAGATATTGGAGGATAACAGCTTTGAGCAGTTCGTGAT
CAACTACTGCAATGAGAGGCTACAGCAGGTGTTCATAGAACTGACCCTGAAGGAAGAACAGGAGGAATAC
AAGAGAGAAGGCATACCGTGGACAAAGGTGGAATACTTTGACAACGGCATCATCTGTAACCTCATTGAAC
ATAGTCAGCGAGGTATCCTGGCCATGCTGGACGAGGAGTGCCTGAGACCCGGGGTGGTTAGTGACTCCAC
CTTCTTAGCGAAGCTGAACCAGCTCTTCTCTAAGCACAGTCACTACGAGAGTAAAGTCTCCCAGAATGCC
CAGCGCCAGTACGACCGCACCATGGGCCTCAGCTGCTTCCGCATCAGCCACTACGCGGGCAAGGTGACCT
ACAACGTGACCGGCTTCATCGACAAGAATAACGACCTACTCTTCCGAGACCTATCCCAGACAATGTGGAA
GGCCCAGCATCCCCTCCTGAAGTCCTTGTTTCCAGAGGGGAACCCCAAGGAAGCGTCTCTCAAACGACCC
CCGACTGCCGGGACCCAGTTTAAGAATTCGGTGGCTGTACTCATGAAGAACCTGTATTCTAAGAACCCCA
ACTACATCAGGTGCATAAAGCCCAATGACCAGCAGCAGAAAGGCAGGTTCACCTCAGAGATGGTTATGGT
CCAGGCGCGATACCTGGGGCTGCTGGAGAATGTTCGGGTGCGCAGGGCTGGCTATGCCTTCCGCCAGGGC
TATAAGCCTTTCCTGGAAAGGTACCGATTGCTGAGCCGGAGCACCTGGCCTCGCTGGAATGGGGATGATC
GGGAAGGTGTGGAGAAGGTACTCGGGTCTCTGACTTTGTCCTCAGAGGAGCTGGCCTACGGGAAGACAAA
GATCTTCATCAGAAGCCCCAAAACTCTTTTCTACCTGGAAGAACAAAGGCGCCTGAGGCTTCAGCAGCTG
GCCACCCTCATACAGAAGGTCTACCGCGGCTGGCGCTGTCGGACCCACTACCAGCAGATGCGGAAGAGCC
AAATCCTCATCTCGGCTTGGTTTCGGGGCAACAAGCAAAAGAAGCACTATGGGAAGATACGGTCGTCAGT
GCTGCTGATCCAGGCTTTCGTGAGGGGCTGGAGGGCCCGCAAGAACTATCGAAAATACTTCCGGTCAGGT
GCTGCCCTCACCTTGGCAAATTTTATCTACCAGAGCATGGCACAGAAATTCCTCTTGAATCTGAAGAAGA
ATTTGCCATCCACCAAAGTGTTGGACAACACATGGCCAGCCGCCCCTTACAGGTGCTTCAACACAGCCAA
TCAGGAGCTGCAGCGCCTCTTCTACCAGTGGAAGTGCAAGAAGTTCCGAGATCAGCTGTCCCCGAAGCAG
GTGCAGACACTGCGGGAAAAGCTCTGTGCCAGTGAACTGTTTAAGGGCAAGAAGGCTTCCTACCCCCAGA
GTGTGCCTATCCCGTTCCGTGGTGATTACATCGGGCTGCAAGGGAACCCCAAGCTGCAGAGACTGAAGGG
CAGGGAGGAGGGGCCTGTCCTGGTGGCAGACACCGTGAAGAAGGTCAACCGTGGCAATGGCAAGACATCG
GCGCGGATTCTCCTCCTGACCAAGGGGCACGTGATTCTCACGGATGCGAAGAAGTCCCAGGCCCAGATTG
TCATAGGACTGGAGGATGTGGCTGGGGTGTCAGTCAGCAGCCTCCAGGACGGGCTCTTTAGCTTGCATCT
GAGTGAGATGTCATCGGCAGTCTCCAAGGGGGACATCCTGCTAGTGAGCGACCATGTGGTTGAACTGCTG
ACAAAAATGTACCAAGCAGTGTTGGATGCCACACAGAGGCAGCTCTCTGTCACTGTGACTGAGAAGTTCT
CAGTGAGGTTCAAGGAGGGCAGTGTGGCTGTCAAGGTTATCCAGGGCCCCGAGGGGGGTGGGAACAGAAA
ACTGATTTGCAAGAAGAAGGGGAGTAATGCCATGGAGGTGACTGTGCGGTGA

Translation (1043 aa):
MPLLEGPVGVEDLILLEPLDEESLIKNLQLRYENKEIYTYIGNVVISMNPYEQLPIYGPEFIAKYRDYTF
YELKPHIYALANVAYQSLKDRDRDQCILITGESGAGKTEASKLVMSYVAAVCGKGEQVNSVKEQLLQSNP
VLEAFGNAKTIRNNNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRVVKQLKGERNFHIFYQLLAGADA
QLLKALKLEEDTSVYGYLNGEVSKVNGMDDASNFRAVQHAMSVIGFSEEEIRQVLEVTALVLKLGNVKLT
DEFQANGIPASGICDGKGIQEIGEMMGLNSTELERALCSRTMETGKEKVVTVLNVTQAQYARDALAKNIY
SRLFDWIVKRINESIKVGTGEKKKVMGVLDIYGFEILEDNSFEQFVINYCNERLQQVFIELTLKEEQEEY
KREGIPWTKVEYFDNGIICNLIEHSQRGILAMLDEECLRPGVVSDSTFLAKLNQLFSKHSHYESKVSQNA
QRQYDRTMGLSCFRISHYAGKVTYNVTGFIDKNNDLLFRDLSQTMWKAQHPLLKSLFPEGNPKEASLKRP
PTAGTQFKNSVAVLMKNLYSKNPNYIRCIKPNDQQQKGRFTSEMVMVQARYLGLLENVRVRRAGYAFRQG
YKPFLERYRLLSRSTWPRWNGDDREGVEKVLGSLTLSSEELAYGKTKIFIRSPKTLFYLEEQRRLRLQQL
ATLIQKVYRGWRCRTHYQQMRKSQILISAWFRGNKQKKHYGKIRSSVLLIQAFVRGWRARKNYRKYFRSG
AALTLANFIYQSMAQKFLLNLKKNLPSTKVLDNTWPAAPYRCFNTANQELQRLFYQWKCKKFRDQLSPKQ
VQTLREKLCASELFKGKKASYPQSVPIPFRGDYIGLQGNPKLQRLKGREEGPVLVADTVKKVNRGNGKTS
ARILLLTKGHVILTDAKKSQAQIVIGLEDVAGVSVSSLQDGLFSLHLSEMSSAVSKGDILLVSDHVVELL
TKMYQAVLDATQRQLSVTVTEKFSVRFKEGSVAVKVIQGPEGGGNRKLICKKKGSNAMEVTVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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