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Report for CCDS81459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81459.1 Public Homo sapiens 10 NPY4R2 24 110 108 CCDS HistoryNCBI Gene:100996758Re-query CCDS DB by CCDS ID:81459.1Re-query CCDS DB by GeneID:100996758See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 81459.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000613306.1 ENSP00000489924.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613306.1Link to Ensembl Protein Viewer:ENSP00000489924.1Re-query CCDS DB by Nucleotide ID:ENST00000613306Re-query CCDS DB by Protein ID:ENSP00000489924
Original member Current member EBI ENST00000576178.7 ENSP00000490174.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000576178.7Link to Ensembl Protein Viewer:ENSP00000490174.1Re-query CCDS DB by Nucleotide ID:ENST00000576178Re-query CCDS DB by Protein ID:ENSP00000490174
Original member Current member NCBI NM_001278795.2 NP_001265724.1 Accepted alive Link to Nucleotide Sequence:NM_001278795.2Link to Protein Sequence:NP_001265724.1Re-query CCDS DB by Nucleotide ID:NM_001278795Re-query CCDS DB by Protein ID:NP_001265724Link to BLAST:NP_001265724.1
Original member Current member NCBI NM_001395253.1 NP_001382182.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395253.1Link to Protein Sequence:NP_001382182.1Re-query CCDS DB by Nucleotide ID:NM_001395253Re-query CCDS DB by Protein ID:NP_001382182Link to BLAST:NP_001382182.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265724.1 375 P0DQD5 375 100% 0 0
NP_001382182.1 375 P0DQD5 375 100% 0 0

Chromosomal Locations for CCDS 81459.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 47921988 47923115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGAACACCTCTCACCTCCTGGCCTTGCTGCTCCCAAAATCTCCACAAGGTGAAAACAGAAGCAAACCCC
TGGGCACCCCATACAACTTCTCTGAACATTGCCAGGATTCCGTGGACGTGATGGTCTTCATTGTCACTTC
CTACAGCATTGAGACTGTCGTGGGGGTCCTGGGTAACCTCTGCCTGATGTGTGTAACTGTGAGGCAGAAG
GAGAAAGCCAACGTGACCAACCTGCTTATCGCCAACCTGGCCTTCTCTGACTTCCTCATGTGCCTCCTCT
GCCAGCCGCTGACCGCCGTCTACACCATCATGGACTACTGGATCTTTGGAGAGACCCTCTGCAAGATGTC
GGCCTTCATCCAGTGCATGTCGGTGACGGTCTCCATCCTCTCGCTCGTCCTCGTGGCCCTGGAGAGGCAT
CAGCTCATCATCAACCCAACAGGCTGGAAGCCCAGCATCTCACAGGCCTACCTGGGGATTGTGCTCATCT
GGGTCATTGCCTGTGTCCTCTCCCTGCCCTTCCTGGCCAACAGCATCCTGGAGAATGTCTTCCACAAGAA
CCACTCCAAGGCTCTGGAGTTCCTGGCGGATAAGGTGGTCTGTACCGAGTCCTGGCCACTGGCTCACCAC
CGCACCATCTACACCACCTTCCTGCTCCTCTTCCAGTACTGCCTCCCACTGGGCTTCATCTTGGTCTGTT
ATGCACGCATCTACCGGCGCCTGCAGAGGCAGGGGCGCGTGTTTCACAAGGGCACCTACAGCTTGCGAGC
TGGGCACATGAAGCAGGTCAATGTGGTGCTGGTGGTGATGGTGGTGGCCTTTGCCGTGCTCTGGCTGCCT
CTGCATGTGTTCAACAGCCTGGAAGACTGGCACCATGAGGCCATCCCCATCTGCCATGGGAACCTCATCT
TCTTAGTGTGCCACTTGCTTGCCATGGCCTCCACCTGTGTCAACCCATTCATCTATGGCTTTCTCAACAC
CAACTTCAAGAAGGAGATCAAGGCCCTGGTGCTGACTTGCCAGCAGAGCGCCCCCCTGGAGGAGTCAGAG
CATCTGCCCCTGTCCACAGTACATACGGAAGTCTCCAAAGGGTCCCTGAGGCTAAGTGGCAGGTCCAATC
CCATTTAA

Translation (375 aa):
MNTSHLLALLLPKSPQGENRSKPLGTPYNFSEHCQDSVDVMVFIVTSYSIETVVGVLGNLCLMCVTVRQK
EKANVTNLLIANLAFSDFLMCLLCQPLTAVYTIMDYWIFGETLCKMSAFIQCMSVTVSILSLVLVALERH
QLIINPTGWKPSISQAYLGIVLIWVIACVLSLPFLANSILENVFHKNHSKALEFLADKVVCTESWPLAHH
RTIYTTFLLLFQYCLPLGFILVCYARIYRRLQRQGRVFHKGTYSLRAGHMKQVNVVLVVMVVAFAVLWLP
LHVFNSLEDWHHEAIPICHGNLIFLVCHLLAMASTCVNPFIYGFLNTNFKKEIKALVLTCQQSAPLEESE
HLPLSTVHTEVSKGSLRLSGRSNPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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