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Report for CCDS42504.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42504.1 Public Homo sapiens 19 ZNF709 24 110 108 CCDS HistoryNCBI Gene:163051Re-query CCDS DB by CCDS ID:42504.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42504.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397732.8 ENSP00000380840.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397732.8Link to Ensembl Protein Viewer:ENSP00000380840.3Re-query CCDS DB by Nucleotide ID:ENST00000397732Re-query CCDS DB by Protein ID:ENSP00000380840
Original member Current member NCBI NM_152601.4 NP_689814.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152601.4Link to Protein Sequence:NP_689814.1Re-query CCDS DB by Nucleotide ID:NM_152601Re-query CCDS DB by Protein ID:NP_689814Link to BLAST:NP_689814.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689814.1 641 Q8N972 641 100% 0 0

Chromosomal Locations for CCDS 42504.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12463996 12465733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12466462 12466519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12466724 12466850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12484655 12484657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGGACTCAGTGGTCTTTGAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGGTCCCT
CTCAGAAGAAACTCTACAGAGATGTGATGCAAGAAACCTTTGTTAACTTGGCCTCTATAGGGGAAAACTG
GGAGGAGAAGAACATTGAAGATCACAAAAATCAGGGGAGAAAGCTAAGAAGTCATATGGTAGAGAGGCTC
TGTGAAAGGAAAGAAGGTAGTCAGTTTGGAGAAACCATCAGTCAGACTCCAAATCCTAAACCAAACAAGA
AAACTTTTACTAGAGTAAAACCATATGAATGTAGTGTGTGTGGAAAGGACTATATGTGTCATTCATCTCT
TAATAGGCACATGAGATCTCATACTGAACATAGATCATATGAATATCACAAATATGGAGAGAAATCATAT
GAATGTAAGGAATGTGGGAAAAGATTCAGCTTTCGAAGTTCATTTCGAATACATGAAAGAACTCACACTG
GAGAGAAACCCTATAAATGTAAACAGTGTGGTAAGGCTTTCAGTTGGCCCAGTTCCTTTCAAATACATGA
AAGAACTCATACTGGAGAGAAACCTTATGAATGTAAGGAATGTGGGAAGGCCTTCATTTATCACACAACC
TTTCGAGGACACATGAGAATGCACACAGGGGAGAAACCCTATAAATGTAAAGAATGCGGGAAAACGTTCA
GTCATCCCAGTTCTTTTCGAAATCATGAAAGAACTCACTCTGGAGAGAAACCCTATGAATGTAAACAATG
TGGAAAAGCTTTCAGATATTACCAAACTTTTCAAATACATGAAAGGACTCACACTGGGGAAAAACCCTAT
CAGTGTAAGCAATGTGGTAAAGCTCTTAGTTGTCCCACATCCTTTCGAAGTCATGAAAGGATTCACACTG
GAGAAAAACCCTATAAATGTAAAAAATGTGGGAAAGCCTTCAGTTTTCCTAGTTCCTTTAGAAAACATGA
AAGAATTCATACAGGAGAGAAACCCTATGATTGTAAGGAATGTGGGAAAGCATTCATTTCTCTTCCAAGC
TATCGAAGACATATGATAATGCACACTGGAAATGGACCTTATAAATGCAAGGAATGTGGGAAAGCCTTTG
ATTGTCCTAGTTCTTTTCAAATCCATGAACGAACTCACACTGGAGAGAAACCCTATGAATGTAAACAGTG
TGGTAAAGCCTTCAGTTGTTCCAGTTCCTTTCGAATGCATGAAAGAACTCACACTGGAGAGAAACCCCAT
GAATGTAAACAATGTGGTAAAGCCTTCAGTTGTTCCAGTTCTGTTCGAATACATGAAAGGACTCACACTG
GAGAGAAACCCTATGAATGTAAACAGTGTGGTAAAGCCTTCAGTTGTTCCAGTTCCTTTCGAATGCATGA
AAGAATTCACACTGGAGAGAAACCCTATGAATGTAAACAGTGTGGTAAAGCCTTTAGTTTTTCTAGTTCC
TTTCGGATGCATGAAAGGACTCACACTGGAGAGAAACCCTATGAATGTAAACAATGTGGTAAAGCCTTCA
GTTGTTCCAGTTCCTTTCGAATGCATGAAAGGACTCACACTGGGGAGAAACCCTATGAATGTAAACAGTG
TGGTAAGGCGTTTAGTTGTTCCAGTTCCATTCGAATACATGAAAGGACTCACACTGGAGAGAAACCTTAT
GAGTGTAAACAATGTGGTAAGGCCTTCAGTTGTTCTAGTTCTGTTCGAATGCATGAAAGGACTCACACTG
GAGTGAAACCCTATGAATGTAAACAATGTGACAAAGCCTTCAGTTGCTCACGTTCCTTTCGAATCCATGA
ACGAACTCACACTGGAGAGAAACCCTATGCATGTCAACAATGTGGTAAAGCCTTCAAGTGTTCCCGTTCC
TTTCGAATACATGAAAGAGTTCATAGTGGAGAGTAA

Translation (641 aa):
MDSVVFEDVAVNFTQEEWALLGPSQKKLYRDVMQETFVNLASIGENWEEKNIEDHKNQGRKLRSHMVERL
CERKEGSQFGETISQTPNPKPNKKTFTRVKPYECSVCGKDYMCHSSLNRHMRSHTEHRSYEYHKYGEKSY
ECKECGKRFSFRSSFRIHERTHTGEKPYKCKQCGKAFSWPSSFQIHERTHTGEKPYECKECGKAFIYHTT
FRGHMRMHTGEKPYKCKECGKTFSHPSSFRNHERTHSGEKPYECKQCGKAFRYYQTFQIHERTHTGEKPY
QCKQCGKALSCPTSFRSHERIHTGEKPYKCKKCGKAFSFPSSFRKHERIHTGEKPYDCKECGKAFISLPS
YRRHMIMHTGNGPYKCKECGKAFDCPSSFQIHERTHTGEKPYECKQCGKAFSCSSSFRMHERTHTGEKPH
ECKQCGKAFSCSSSVRIHERTHTGEKPYECKQCGKAFSCSSSFRMHERIHTGEKPYECKQCGKAFSFSSS
FRMHERTHTGEKPYECKQCGKAFSCSSSFRMHERTHTGEKPYECKQCGKAFSCSSSIRIHERTHTGEKPY
ECKQCGKAFSCSSSVRMHERTHTGVKPYECKQCDKAFSCSRSFRIHERTHTGEKPYACQQCGKAFKCSRS
FRIHERVHSGE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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