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Report for CCDS45031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45031.1 Public Homo sapiens 13 CCNA1 24 110 108 CCDS HistoryNCBI Gene:8900Re-query CCDS DB by CCDS ID:45031.1Re-query CCDS DB by GeneID:8900See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45031.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000440264.5 ENSP00000400666.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440264.5Link to Ensembl Protein Viewer:ENSP00000400666.1Re-query CCDS DB by Nucleotide ID:ENST00000440264Re-query CCDS DB by Protein ID:ENSP00000400666
Original member Current member EBI ENST00000630422.2 ENSP00000486482.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000630422.2Link to Ensembl Protein Viewer:ENSP00000486482.1Re-query CCDS DB by Nucleotide ID:ENST00000630422Re-query CCDS DB by Protein ID:ENSP00000486482
Original member Current member NCBI NM_001111046.2 NP_001104516.1 Accepted alive Link to Nucleotide Sequence:NM_001111046.2Link to Protein Sequence:NP_001104516.1Re-query CCDS DB by Nucleotide ID:NM_001111046Re-query CCDS DB by Protein ID:NP_001104516Link to BLAST:NP_001104516.1
Original member Current member NCBI NM_001111047.2 NP_001104517.1 Accepted alive Link to Nucleotide Sequence:NM_001111047.2Link to Protein Sequence:NP_001104517.1Re-query CCDS DB by Nucleotide ID:NM_001111047Re-query CCDS DB by Protein ID:NP_001104517Link to BLAST:NP_001104517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001104516.1 421 P78396-3 421 100% 0 0
NP_001104517.1 421 P78396-3 421 100% 0 0

Chromosomal Locations for CCDS 45031.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 36433057 36433221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 36437629 36437875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 36438067 36438191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 36438644 36438867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 36439979 36440183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 36441118 36441231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 36442171 36442304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 36442614 36442665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1266 nt):
ATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCGAGGTCCCGATGCTTGTCAGA
TACTCACCAGAGCCCCGCTGGGCCAGGATCCCCCGCAGAGGACAGTGCTAGGGCTGCTAACTGCAAATGG
GCAGTACAGGAGGACCTGTGGCCAGGGGATCACAAGAATCAGGTGTTATTCTGGATCAGAAAATGCCTTC
CCTCCAGCTGGAAAGAAAGCACTCCCTGACTGTGGGGTCCAAGAGCCCCCCAAGCAAGGGTTTGACATCT
ACATGGATGAACTAGAGCAGGGGGACAGAGACAGCTGCTCGGTCAGAGAGGGGATGGCATTTGAGGATGT
GTATGAAGTAGACACCGGCACACTCAAGTCAGACCTGCACTTCCTGCTGGATTTCAACACAGTTTCCCCT
ATGCTGGTAGATTCATCTCTCCTCTCCCAGTCTGAAGATATATCCAGTCTTGGCACAGATGTGATAAATG
TGACTGAATATGCTGAAGAAATTTATCAGTACCTTAGGGAAGCTGAAATAAGGCACAGACCCAAAGCACA
CTACATGAAGAAGCAGCCAGACATCACGGAAGGCATGCGCACGATTCTGGTGGACTGGCTGGTGGAGGTT
GGGGAAGAATATAAACTTCGAGCAGAGACCCTGTATCTGGCTGTCAACTTCCTGGACAGGTTCCTTTCAT
GTATGTCTGTTCTGAGAGGGAAACTGCAGCTCGTAGGAACAGCAGCTATGCTTTTGGCTTCGAAATATGA
AGAGATATATCCTCCTGAAGTAGACGAGTTTGTCTATATCACCGATGATACATACACAAAACGACAACTG
TTAAAAATGGAACACTTGCTTCTGAAAGTTCTAGCTTTTGATCTGACAGTACCAACCACCAACCAGTTTC
TCCTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGGACTGAGAACCTGGCTAAGTACGTAGCAGAGCT
GAGTCTACTTGAAGCAGATCCATTCTTGAAATATCTTCCTTCACTGATAGCTGCAGCAGCTTTTTGCCTG
GCAAACTATACTGTGAACAAGCACTTTTGGCCAGAAACCCTTGCTGCATTTACAGGGTATTCATTAAGTG
AAATTGTGCCTTGCCTGAGTGAGCTTCATAAAGCGTACCTTGATATACCCCATCGACCTCAGCAAGCAAT
TAGGGAGAAGTACAAGGCTTCAAAGTACCTGTGTGTGTCCCTCATGGAGCCACCTGCAGTTCTTCTTCTA
CAATAA

Translation (421 aa):
MHCSNPKSGVVLATVARGPDACQILTRAPLGQDPPQRTVLGLLTANGQYRRTCGQGITRIRCYSGSENAF
PPAGKKALPDCGVQEPPKQGFDIYMDELEQGDRDSCSVREGMAFEDVYEVDTGTLKSDLHFLLDFNTVSP
MLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEGMRTILVDWLVEV
GEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQL
LKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAELSLLEADPFLKYLPSLIAAAAFCL
ANYTVNKHFWPETLAAFTGYSLSEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEPPAVLLL
Q


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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