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Report for CCDS1959.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1959.1 Public Homo sapiens 2 EVA1A 24 110 108 CCDS HistoryNCBI Gene:84141Re-query CCDS DB by CCDS ID:1959.1Re-query CCDS DB by GeneID:84141See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1959.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000233712.5 ENSP00000233712.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000233712.5Link to Ensembl Protein Viewer:ENSP00000233712.1Re-query CCDS DB by Nucleotide ID:ENST00000233712Re-query CCDS DB by Protein ID:ENSP00000233712
Original member Current member EBI ENST00000393913.8 ENSP00000377490.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393913.8Link to Ensembl Protein Viewer:ENSP00000377490.3Re-query CCDS DB by Nucleotide ID:ENST00000393913Re-query CCDS DB by Protein ID:ENSP00000377490
Original member Current member EBI ENST00000410113.5 ENSP00000386435.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000410113.5Link to Ensembl Protein Viewer:ENSP00000386435.1Re-query CCDS DB by Nucleotide ID:ENST00000410113Re-query CCDS DB by Protein ID:ENSP00000386435
Original member Current member EBI ENST00000410071.5 ENSP00000386930.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000410071.5Link to Ensembl Protein Viewer:ENSP00000386930.1Re-query CCDS DB by Nucleotide ID:ENST00000410071Re-query CCDS DB by Protein ID:ENSP00000386930
Original member Current member NCBI NM_001135032.2 NP_001128504.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135032.2Link to Protein Sequence:NP_001128504.1Re-query CCDS DB by Nucleotide ID:NM_001135032Re-query CCDS DB by Protein ID:NP_001128504Link to BLAST:NP_001128504.1
Original member Current member NCBI NM_001369524.1 NP_001356453.1 Accepted alive Link to Nucleotide Sequence:NM_001369524.1Link to Protein Sequence:NP_001356453.1Re-query CCDS DB by Nucleotide ID:NM_001369524Re-query CCDS DB by Protein ID:NP_001356453Link to BLAST:NP_001356453.1
Original member Current member NCBI NM_001369525.1 NP_001356454.1 Accepted alive Link to Nucleotide Sequence:NM_001369525.1Link to Protein Sequence:NP_001356454.1Re-query CCDS DB by Nucleotide ID:NM_001369525Re-query CCDS DB by Protein ID:NP_001356454Link to BLAST:NP_001356454.1
Original member Current member NCBI NM_032181.3 NP_115557.1 Accepted alive Link to Nucleotide Sequence:NM_032181.3Link to Protein Sequence:NP_115557.1Re-query CCDS DB by Nucleotide ID:NM_032181Re-query CCDS DB by Protein ID:NP_115557Link to BLAST:NP_115557.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128504.1 152 Q9H8M9 152 100% 0 0
NP_001356453.1 152 Q9H8M9 152 100% 0 0
NP_001356454.1 152 Q9H8M9 152 100% 0 0
NP_115557.1 152 Q9H8M9 152 100% 0 0

Chromosomal Locations for CCDS 1959.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 75493236 75493609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 75518056 75518140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGAGGCTGCCCCTCAGCCACAGCCCAGAGCACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGGCCT
AT
TCCTTTGTCTCAGAAAATCCTGAGCGAGCAGCTCTGTACTTTGTTTCTGGCGTGTGCATCGGGCTGGT
G
CTGACCCTGGCTGCTCTGGTGATAAGGATCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGAAGAAG
TTC
CTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGGACACCGTGTCCG
AT
CTCTCCGTGCGGAGACACCGCCGCTTCGAGAGGACTTTGAACAAGAATGTGTTCACCTCTGCGGAGGA
G
CTGGAGCGCGCCCAGCGGCTGGAGGAGCGCGAGCGCATCATCAGGGAGATCTGGATGAATGGCCAGCCT
GAG
GTGCCCGGGACCAGGAGCCTGAATCGCTACTATTAG


Translation (152 aa):
MRLPLSHSPEHVEMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCHTDCRRRPGKK
F
LQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEERERIIREIWMNGQP
E
VPGTRSLNRYY




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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