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Report for CCDS44660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44660.1 Public Homo sapiens 11 KMT5B 24 110 108 CCDS HistoryNCBI Gene:51111Re-query CCDS DB by CCDS ID:44660.1Re-query CCDS DB by GeneID:51111See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405515.5 ENSP00000385640.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405515.5Link to Ensembl Protein Viewer:ENSP00000385640.1Re-query CCDS DB by Nucleotide ID:ENST00000405515Re-query CCDS DB by Protein ID:ENSP00000385640
Original member Current member EBI ENST00000401547.6 ENSP00000385965.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401547.6Link to Ensembl Protein Viewer:ENSP00000385965.2Re-query CCDS DB by Nucleotide ID:ENST00000401547Re-query CCDS DB by Protein ID:ENSP00000385965
Original member Current member NCBI NM_001369427.1 NP_001356356.1 Accepted alive Link to Nucleotide Sequence:NM_001369427.1Link to Protein Sequence:NP_001356356.1Re-query CCDS DB by Nucleotide ID:NM_001369427Re-query CCDS DB by Protein ID:NP_001356356Link to BLAST:NP_001356356.1
Original member Current member NCBI NM_016028.4 NP_057112.3 Accepted alive Link to Nucleotide Sequence:NM_016028.4Link to Protein Sequence:NP_057112.3Re-query CCDS DB by Nucleotide ID:NM_016028Re-query CCDS DB by Protein ID:NP_057112Link to BLAST:NP_057112.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356356.1 393 Q4FZB7-2 393 100% 0 0
NP_057112.3 393 Q4FZB7-2 393 100% 0 0

Chromosomal Locations for CCDS 44660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 68166974 68167178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68171015 68171151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68171232 68171251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68171543 68171709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68173804 68173913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68175018 68175183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68180132 68180200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68185781 68185928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 68189917 68190076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1182 nt):
ATGAAGTGGTTGGGAGAATCCAAGAACATGGTGGTGAATGGCAGGAGAAATGGAGGCAAGTTGTCTAATG
ACCATCAGCAGAATCAATCAAAATTACAGCACACGGGGAAGGACACCCTGAAGGCTGGCAAAAATGCAGT
CGAGAGGAGGTCGAACAGATGTAATGGTAACTCGGGATTTGAAGGACAGAGTCGCTATGTACCATCCTCT
GGAATGTCCGCCAAGGAACTCTGTGAAAATGATGACCTAGCAACCAGTTTGGTTCTTGATCCCTATTTAG
GTTTTCAAACACACAAAATGAATACTAGCGCCTTTCCTTCGAGGAGCTCAAGGCATTTTTCAAAATCTGA
CAGTTTTTCTCACAACAACCCTGTGAGATTTAGGCCTATTAAAGGAAGGCAGGAAGAACTAAAGGAAGTA
ATTGAACGTTTTAAGAAAGATGAACACTTGGAGAAAGCCTTCAAATGTTTGACTTCAGGCGAATGGGCAC
GGCACTATTTTCTCAACAAGAATAAAATGCAGGAGAAATTATTCAAAGAACATGTATTTATTTATTTGCG
AATGTTTGCAACTGACAGTGGATTTGAAATATTGCCATGTAATAGATACTCATCAGAACAAAATGGAGCC
AAAATAGTTGCAACAAAAGAGTGGAAACGAAATGACAAAATAGAATTACTGGTGGGTTGTATTGCCGAAC
TTTCAGAAATTGAGGAGAACATGCTACTTAGACATGGAGAAAACGACTTCAGTGTCATGTACTCCACAAG
GAAAAACTGTGCTCAACTCTGGCTGGGTCCTGCTGCGTTTATAAACCATGATTGCAGACCTAATTGTAAG
TTTGTGTCAACTGGTCGAGATACAGCATGTGTGAAGGCTCTAAGAGACATTGAACCTGGAGAAGAAATTT
CTTGTTATTATGGAGATGGGTTCTTTGGAGAAAATAATGAGTTCTGCGAGTGTTACACTTGCGAAAGACG
GGGCACTGGTGCTTTTAAATCCAGAGTGGGACTGCCTGCGCCTGCTCCTGTTATCAATAGCAAATATGGA
CTCAGAGAAACAGATAAACGTTTAAATAGGCTTAAAAAGTTAGGTGACAGCAGCAAAAATTCAGACAGTC
AATCTGTCAGCTCTAACACTGATGCAGATACCACTCAGGAAAAAAACAATGCAAGTAAGTAA

Translation (393 aa):
MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGFEGQSRYVPSS
GMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNPVRFRPIKGRQEELKEV
IERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGA
KIVATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCK
FVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYG
LRETDKRLNRLKKLGDSSKNSDSQSVSSNTDADTTQEKNNASK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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