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Report for CCDS11172.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11172.1 Public Homo sapiens 17 ZNF286A 24 110 108 CCDS HistoryNCBI Gene:57335Re-query CCDS DB by CCDS ID:11172.1Re-query CCDS DB by GeneID:57335See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11172.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421016.5 ENSP00000397163.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421016.5Link to Ensembl Protein Viewer:ENSP00000397163.1Re-query CCDS DB by Nucleotide ID:ENST00000421016Re-query CCDS DB by Protein ID:ENSP00000397163
Original member Current member EBI ENST00000413242.6 ENSP00000458062.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000413242.6Link to Ensembl Protein Viewer:ENSP00000458062.1Re-query CCDS DB by Nucleotide ID:ENST00000413242Re-query CCDS DB by Protein ID:ENSP00000458062
Original member Current member EBI ENST00000583566.6 ENSP00000464063.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000583566.6Link to Ensembl Protein Viewer:ENSP00000464063.1Re-query CCDS DB by Nucleotide ID:ENST00000583566Re-query CCDS DB by Protein ID:ENSP00000464063
Original member Current member EBI ENST00000464847.6 ENSP00000464218.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000464847.6Link to Ensembl Protein Viewer:ENSP00000464218.1Re-query CCDS DB by Nucleotide ID:ENST00000464847Re-query CCDS DB by Protein ID:ENSP00000464218
Original member Current member EBI ENST00000691327.1 ENSP00000510294.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000691327.1Link to Ensembl Protein Viewer:ENSP00000510294.1Re-query CCDS DB by Nucleotide ID:ENST00000691327Re-query CCDS DB by Protein ID:ENSP00000510294
Original member Current member NCBI NM_001130842.2 NP_001124314.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130842.2Link to Protein Sequence:NP_001124314.1Re-query CCDS DB by Nucleotide ID:NM_001130842Re-query CCDS DB by Protein ID:NP_001124314Link to BLAST:NP_001124314.1
Original member Current member NCBI NM_020652.3 NP_065703.1 Accepted alive Link to Nucleotide Sequence:NM_020652.3Link to Protein Sequence:NP_065703.1Re-query CCDS DB by Nucleotide ID:NM_020652Re-query CCDS DB by Protein ID:NP_065703Link to BLAST:NP_065703.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124314.1 521 Q9HBT8-1 521 100% 0 0
NP_065703.1 521 Q9HBT8-1 521 100% 0 0

Chromosomal Locations for CCDS 11172.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 15700330 15700366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15701152 15701240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15706387 15706501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15708155 15708247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15716059 15717290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGGAGACAGATTTGGCTGAAATGCCTGAGAAAGGAGCTCTGTCTTCCCAGGATTCTCCCCATTTCCAAG
AGAAGAGCACAGAAGAGGGAGAAGTGGCTGCTCTGCGCCTCACGGCCAGATCCCAGGAAACAGTGACATT
CAAGGATGTGGCCATGGACTTTACACCAGAGGAGTGGGGGAAGCTGGATCCTGCACAAAGGGATGTGATG
CTGGAGAACTATAGGAACCTAGTCTCACTTTGGCTTCCAGTTTCCAAACCTGAGAGCTACAACTTGGAGA
ATGGAAAAGAACCATTGAAGCTTGAGAGAAAAGCCCCCAAAAGCAGCTATTCAGACATGGAGACTAGACC
ACAGAGCAAGGATTCAACTTCAGTGCAAGATTTTTCCAAAGCAGAATCATGCAAAGTTGCAATAATAGAC
AGACTGACACGGAATAGTGTCTATGACTCTAACTTGGAAGCAGCCCTTGAATGTGAAAATTGGTTAGAGA
ATCAGCAAGGAAATCAGGAGAGACATTTGAGAGAAATGTTCACTCACATGAATTCACTCTCTGAGGAAAC
AGACCATAAGCATGATGTATACTGGAAAAGCTTCAATCAGAAATCTGTCCTTATCACTGAAGACAGAGTT
CCCAAAGGATCTTATGCCTTCCATACACTTGAAAAAAGCTTGAAACAAAAATCAAACTTAATGAAAAAGC
AGAGAACTTATAAAGAGAAAAAACCTCATAAATGTAATGATTGTGGTGAACTCTTCACCTACCATTCAGT
GCTTATTCGACACCAGAGAGTCCATACTGGAGAGAAACCCTATACCTGCAATGAATGTGGGAAATCTTTT
AGCCACAGAGCTAATTTAACTAAACACCAGAGAACTCATACTAGAATTCTCTTTGAATGCAGTGAATGCA
AGAAAACCTTCACAGAAAGCTCATCCCTTGCAACACATCAGAGAATTCACGTTGGAGAGAGACCTTATGA
ATGCAATGAATGTGGGAAAGGTTTTAATCGAAGTACACATCTTGTGCAGCATCAGTTGATTCATACTGGA
GTGAAGCCTTATGAATGTAATGAATGTGATAAAGCTTTTATTCATTCATCAGCACTCATTAAACATCAAA
GAACTCATACTGGAGAGAAACCTTATAAATGTCAAGAATGTGGGAAAGCCTTTAGCCATTGCTCATCCCT
AACTAAGCATCAGAGAGTTCATACTGGAGAAAAGCCATATGAATGCAGTGAATGTGGAAAAACTTTTAGT
CAGAGCACACATCTTGTTCAACATCAGAGAATTCACACTGGAGAGAAACCCTATGAGTGTAATGAATGTG
GGAAAACCTTCAGCCGGAGCTCCAATTTTGCTAAACATCAAAGAATTCATATTGGAAAGAAACCGTACAA
ATGTAGCGAGTGTGGAAAAGCCTTCATTCATTCATCAGCTCTCATTCAACATCAGAGAACTCATACCGGA
GAGAAACCCTTTAGATGTAATGAGTGTGGGAAAAGCTTTAAGTGCAGTTCATCTCTCATCAGACATCAAA
GAGTTCACACTGAAGAGCAACCCTGA

Translation (521 aa):
METDLAEMPEKGALSSQDSPHFQEKSTEEGEVAALRLTARSQETVTFKDVAMDFTPEEWGKLDPAQRDVM
LENYRNLVSLWLPVSKPESYNLENGKEPLKLERKAPKSSYSDMETRPQSKDSTSVQDFSKAESCKVAIID
RLTRNSVYDSNLEAALECENWLENQQGNQERHLREMFTHMNSLSEETDHKHDVYWKSFNQKSVLITEDRV
PKGSYAFHTLEKSLKQKSNLMKKQRTYKEKKPHKCNDCGELFTYHSVLIRHQRVHTGEKPYTCNECGKSF
SHRANLTKHQRTHTRILFECSECKKTFTESSSLATHQRIHVGERPYECNECGKGFNRSTHLVQHQLIHTG
VKPYECNECDKAFIHSSALIKHQRTHTGEKPYKCQECGKAFSHCSSLTKHQRVHTGEKPYECSECGKTFS
QSTHLVQHQRIHTGEKPYECNECGKTFSRSSNFAKHQRIHIGKKPYKCSECGKAFIHSSALIQHQRTHTG
EKPFRCNECGKSFKCSSSLIRHQRVHTEEQP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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