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Report for CCDS27691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27691.1 Public Mus musculus 15 Cyp2d9 23 108 98 CCDS HistoryNCBI Gene:13105Re-query CCDS DB by CCDS ID:27691.1Re-query CCDS DB by GeneID:13105See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089129.6 ENSMUSP00000086530.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089129.6Link to Ensembl Protein Viewer:ENSMUSP00000086530.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000089129Re-query CCDS DB by Protein ID:ENSMUSP00000086530
Original member Current member NCBI NM_010006.2 NP_034136.2 Accepted alive Link to Nucleotide Sequence:NM_010006.2Link to Protein Sequence:NP_034136.2Re-query CCDS DB by Nucleotide ID:NM_010006Re-query CCDS DB by Protein ID:NP_034136Link to BLAST:NP_034136.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034136.2 504 P11714 504 100% 0 0

Chromosomal Locations for CCDS 27691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82452452 82452640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82453598 82453769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82454038 82454190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82454281 82454441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82455074 82455250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82455434 82455575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82455772 82455959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82456334 82456475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82456576 82456766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGGAGCTGCTGACTGGGACTGACCTGTGGCCTGTGGCCATATTCACAGTCATCTTCATATTACTGGTGG
ACCTGACCCACCAGCGCCAGCGCTGGACTTCTCGTTACCCACCAGGCCCTGTGCCATGGCCTGTACTGGG
TAACTTGCTGCAGGTGGACCTAGGTAACATGCCATACAGCTTGTACAAGCTTCAAAACCGCTATGGTGAC
GTGTTCAGCCTACAGATGGCCTGGAAGCCTATGGTTGTGATCAATGGACTGAAGGCAATGAAGGAAATGC
TGTTGACCTGTGGAGAGGACACTGCTGACCGCCCTCCAGTGCCCATCTTTGAGTACCTGGGTGTGAAGCC
TGGATCCCAAGGTGTGGTCCTTGCACCCTACGGGCCCGAGTGGCGAGAGCAGAGGCGATTCTCTGTGTCT
ACCCTGCGCAACTTTGGCCTGGGCAAGAAATCACTGGAGGACTGGGTGACCAAGGAGGCCAATCACCTCT
GTGATGCCTTCACCGCCCAGGCTGGGCAGCCCATCAATCCCAACCCCATGCTGAACAAATCCACGTGCAA
TGTGATTGCATCTCTCATTTTTGCCCGTCGCTTTGAATATGAAGACCCTTTCCTCATCAGGATGCTGAAA
GTACTGGAACAAAGTTTGACAGAAGTCTCTGGCTTAATTCCTGAGGTTCTTAATGCATTCCCGATACTCT
TGCGTATCCCAAGGCTGGCTGACAAGGCCCTCCAAGGTCAGAAGTCCTTCATCGCCATACTGGATAACCT
GTTGACTGAGAATAGGACCACCTGGGACCCTGTCCAAGCACCCCGAAATTTGACTGATGCCTTCCTGGCA
GAGATAGAGAAGGCCAAAGGGAATCCTGAGAGCAGCTTCAATGATGAGAACCTGCTCATGGTGGTGCGTG
ACCTGTTTGGTGCAGGGATGCTGACCACCTCAACCACATTGTCCTGGGCCCTGATGCTCATGATCCTGCA
TCCAGATGTGCAGCGCAGAGTCCAACAAGAAATCGATGAGGTCATAGGGCAGGTGAGGCATCCAGAGATG
GCAGACCAGGCCCACATGCCCTACACCAATGCTGTCATTCATGAGGTGCAGCGCTTTGGGGACATTGTTC
CAGTGAATTTGCCACGCATCACAAGTCATGACATTGAAGTGCAGGACTTCCTCATCCCCAAGGGGACGAT
CCTCCTCCCCAACATGTCCTCCATGCTGAAAGATGAGTCTGTCTGGGAGAAGCCCCTCCGCTTCCATCCT
GAACACTTCCTGGATGCCCAGGGCCACTTTGTGAAGCCTGAGGCCTTCATGCCATTCTCAGCAGGCCGCA
GATCATGCCTGGGGGAGGCCCTGGCCCGCATGGAGCTTTTCCTCTTCTTCACCTGCCTCCTGCAGCGCTT
TAGCTTCTCAGTGCCTGATGGACAGCCCCAGCCCAGCAACTCTGGAGTCTATGGTATTCTTGTTGCCCCC
TCTCCCTACCAGCTCTGTGCTGTGGTACGAGACCAAGGACACTAA

Translation (504 aa):
MELLTGTDLWPVAIFTVIFILLVDLTHQRQRWTSRYPPGPVPWPVLGNLLQVDLGNMPYSLYKLQNRYGD
VFSLQMAWKPMVVINGLKAMKEMLLTCGEDTADRPPVPIFEYLGVKPGSQGVVLAPYGPEWREQRRFSVS
TLRNFGLGKKSLEDWVTKEANHLCDAFTAQAGQPINPNPMLNKSTCNVIASLIFARRFEYEDPFLIRMLK
VLEQSLTEVSGLIPEVLNAFPILLRIPRLADKALQGQKSFIAILDNLLTENRTTWDPVQAPRNLTDAFLA
EIEKAKGNPESSFNDENLLMVVRDLFGAGMLTTSTTLSWALMLMILHPDVQRRVQQEIDEVIGQVRHPEM
ADQAHMPYTNAVIHEVQRFGDIVPVNLPRITSHDIEVQDFLIPKGTILLPNMSSMLKDESVWEKPLRFHP
EHFLDAQGHFVKPEAFMPFSAGRRSCLGEALARMELFLFFTCLLQRFSFSVPDGQPQPSNSGVYGILVAP
SPYQLCAVVRDQGH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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