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Report for CCDS11678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11678.1 Public Homo sapiens 17 PRKAR1A 24 110 108 CCDS HistoryNCBI Gene:5573Re-query CCDS DB by CCDS ID:11678.1Re-query CCDS DB by GeneID:5573See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11678.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358598.6 ENSP00000351410.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358598.6Link to Ensembl Protein Viewer:ENSP00000351410.1Re-query CCDS DB by Nucleotide ID:ENST00000358598Re-query CCDS DB by Protein ID:ENSP00000351410
Original member Current member EBI ENST00000392711.5 ENSP00000376475.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392711.5Link to Ensembl Protein Viewer:ENSP00000376475.1Re-query CCDS DB by Nucleotide ID:ENST00000392711Re-query CCDS DB by Protein ID:ENSP00000376475
Original member Current member EBI ENST00000536854.6 ENSP00000445625.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536854.6Link to Ensembl Protein Viewer:ENSP00000445625.1Re-query CCDS DB by Nucleotide ID:ENST00000536854Re-query CCDS DB by Protein ID:ENSP00000445625
Original member Current member EBI ENST00000585427.6 ENSP00000464715.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000585427.6Link to Ensembl Protein Viewer:ENSP00000464715.2Re-query CCDS DB by Nucleotide ID:ENST00000585427Re-query CCDS DB by Protein ID:ENSP00000464715
Original member Current member EBI ENST00000589228.6 ENSP00000464977.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000589228.6Link to Ensembl Protein Viewer:ENSP00000464977.2Re-query CCDS DB by Nucleotide ID:ENST00000589228Re-query CCDS DB by Protein ID:ENSP00000464977
Original member Current member EBI ENST00000588178.6 ENSP00000465013.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588178.6Link to Ensembl Protein Viewer:ENSP00000465013.2Re-query CCDS DB by Nucleotide ID:ENST00000588178Re-query CCDS DB by Protein ID:ENSP00000465013
Original member Current member EBI ENST00000589017.6 ENSP00000465445.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589017.6Link to Ensembl Protein Viewer:ENSP00000465445.2Re-query CCDS DB by Nucleotide ID:ENST00000589017Re-query CCDS DB by Protein ID:ENSP00000465445
Original member Current member EBI ENST00000586397.5 ENSP00000466459.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000586397.5Link to Ensembl Protein Viewer:ENSP00000466459.1Re-query CCDS DB by Nucleotide ID:ENST00000586397Re-query CCDS DB by Protein ID:ENSP00000466459
Original member Current member EBI ENST00000589480.6 ENSP00000466649.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589480.6Link to Ensembl Protein Viewer:ENSP00000466649.2Re-query CCDS DB by Nucleotide ID:ENST00000589480Re-query CCDS DB by Protein ID:ENSP00000466649
Original member Current member NCBI NM_001276289.2 NP_001263218.1 Accepted alive Link to Nucleotide Sequence:NM_001276289.2Link to Protein Sequence:NP_001263218.1Re-query CCDS DB by Nucleotide ID:NM_001276289Re-query CCDS DB by Protein ID:NP_001263218Link to BLAST:NP_001263218.1
Original member Current member NCBI NM_001278433.2 NP_001265362.1 Accepted alive Link to Nucleotide Sequence:NM_001278433.2Link to Protein Sequence:NP_001265362.1Re-query CCDS DB by Nucleotide ID:NM_001278433Re-query CCDS DB by Protein ID:NP_001265362Link to BLAST:NP_001265362.1
Original member Current member NCBI NM_001369389.1 NP_001356318.1 Accepted alive Link to Nucleotide Sequence:NM_001369389.1Link to Protein Sequence:NP_001356318.1Re-query CCDS DB by Nucleotide ID:NM_001369389Re-query CCDS DB by Protein ID:NP_001356318Link to BLAST:NP_001356318.1
Original member Current member NCBI NM_001369390.1 NP_001356319.1 Accepted alive Link to Nucleotide Sequence:NM_001369390.1Link to Protein Sequence:NP_001356319.1Re-query CCDS DB by Nucleotide ID:NM_001369390Re-query CCDS DB by Protein ID:NP_001356319Link to BLAST:NP_001356319.1
Original member Current member NCBI NM_002734.5 NP_002725.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002734.5Link to Protein Sequence:NP_002725.1Re-query CCDS DB by Nucleotide ID:NM_002734Re-query CCDS DB by Protein ID:NP_002725Link to BLAST:NP_002725.1
Original member Current member NCBI NM_212471.3 NP_997636.1 Accepted alive Link to Nucleotide Sequence:NM_212471.3Link to Protein Sequence:NP_997636.1Re-query CCDS DB by Nucleotide ID:NM_212471Re-query CCDS DB by Protein ID:NP_997636Link to BLAST:NP_997636.1
Original member Current member NCBI NM_212472.2 NP_997637.1 Accepted alive Link to Nucleotide Sequence:NM_212472.2Link to Protein Sequence:NP_997637.1Re-query CCDS DB by Nucleotide ID:NM_212472Re-query CCDS DB by Protein ID:NP_997637Link to BLAST:NP_997637.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263218.1 381 P10644-1 381 100% 0 0
NP_001265362.1 381 P10644-1 381 100% 0 0
NP_001356318.1 381 P10644-1 381 100% 0 0
NP_001356319.1 381 P10644-1 381 100% 0 0
NP_002725.1 381 P10644-1 381 100% 0 0
NP_997636.1 381 P10644-1 381 100% 0 0
NP_997637.1 381 P10644-1 381 100% 0 0

Chromosomal Locations for CCDS 11678.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 68515400 68515576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68522756 68522926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68523725 68523816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68524016 68524077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68524912 68524958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68525754 68525912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68527840 68527900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68528870 68528991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68529920 68530001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68530277 68530449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGGAGTCTGGCAGTACCGCCGCCAGTGAGGAGGCACGCAGCCTTCGAGAATGTGAGCTCTACGTCCAGA
AGCATAACATTCAAGCGCTGCTCAAAGATTCTATTGTGCAGTTGTGCACTGCTCGACCTGAGAGACCCAT
GGCATTCCTCAGGGAATACTTTGAGAGGTTGGAGAAGGAGGAGGCAAAACAGATTCAGAATCTGCAGAAA
GCAGGCACTCGTACAGACTCAAGGGAGGATGAGATTTCTCCTCCTCCACCCAACCCAGTGGTTAAAGGTA
GGAGGCGACGAGGTGCTATCAGCGCTGAGGTCTACACGGAGGAAGATGCGGCATCCTATGTTAGAAAGGT
TATACCAAAAGATTACAAGACAATGGCCGCTTTAGCCAAAGCCATTGAAAAGAATGTGCTGTTTTCACAT
CTTGATGATAATGAGAGAAGTGATATTTTTGATGCCATGTTTTCGGTCTCCTTTATCGCAGGAGAGACTG
TGATTCAGCAAGGTGATGAAGGGGATAACTTCTATGTGATTGATCAAGGAGAGACGGATGTCTATGTTAA
CAATGAATGGGCAACCAGTGTTGGGGAAGGAGGGAGCTTTGGAGAACTTGCTTTGATTTATGGAACACCG
AGAGCAGCCACTGTCAAAGCAAAGACAAATGTGAAATTGTGGGGCATCGACCGAGACAGCTATAGAAGAA
TCCTCATGGGAAGCACACTGAGAAAGCGGAAGATGTATGAGGAATTCCTTAGTAAAGTCTCTATTTTAGA
GTCTCTGGACAAGTGGGAACGTCTTACGGTAGCTGATGCATTGGAACCAGTGCAGTTTGAAGATGGGCAG
AAGATTGTGGTGCAGGGAGAACCAGGGGATGAGTTCTTCATTATTTTAGAGGGGTCAGCTGCTGTGCTAC
AACGTCGGTCAGAAAATGAAGAGTTTGTTGAAGTGGGAAGATTGGGGCCTTCTGATTATTTTGGTGAAAT
TGCACTACTGATGAATCGTCCTCGTGCTGCCACAGTTGTTGCTCGTGGCCCCTTGAAGTGCGTTAAGCTG
GACCGACCTAGATTTGAACGTGTTCTTGGCCCATGCTCAGACATCCTCAAACGAAACATCCAGCAGTACA
ACAGTTTTGTGTCACTGTCTGTCTGA

Translation (381 aa):
MESGSTAASEEARSLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFERLEKEEAKQIQNLQK
AGTRTDSREDEISPPPPNPVVKGRRRRGAISAEVYTEEDAASYVRKVIPKDYKTMAALAKAIEKNVLFSH
LDDNERSDIFDAMFSVSFIAGETVIQQGDEGDNFYVIDQGETDVYVNNEWATSVGEGGSFGELALIYGTP
RAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQ
KIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKL
DRPRFERVLGPCSDILKRNIQQYNSFVSLSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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